Basic Information:

  VIRBase ID:  

VHID00197776

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H25:  MIMAT0014708          FBXL19:  NM_001282351     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H25	FBXL19
miRBase Accession/Entrez ID	MIMAT0014708	54620
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CXXC11//Fbl19//JHDM1C

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FBXL19	chr16:30951019(+) A-I      intronic chr16:30952252(+) A-I      intronic chr16:30956841(+) A-I      intronic chr16:30955059(+) A-I      intronic chr16:30952154(+) A-I      intronic chr16:30952149(+) A-I      intronic chr16:30952091(+) A-I      intronic chr16:30951724(+) A-I      intronic chr16:30951650(+) A-I      intronic chr16:30951630(+) A-I      intronic chr16:30951536(+) A-I      intronic chr16:30951534(+) A-I      intronic chr16:30956941(+) A-I      intronic chr16:30950217(+) A-I      intronic chr16:30950497(+) A-I      intronic chr16:30957171(+) A-I      intronic chr16:30957605(+) A-I      intronic chr16:30957761(+) A-I      intronic chr16:30950510(+) A-I      intronic chr16:30950568(+) A-I      intronic chr16:30944223(+) A-I      intronic chr16:30944317(+) A-I      intronic chr16:30950574(+) A-I      intronic chr16:30951509(+) A-I      intronic chr16:30951422(+) A-I      intronic chr16:30944662(+) A-I      intronic chr16:30944669(+) A-I      intronic chr16:30944790(+) A-I      intronic chr16:30950603(+) A-I      intronic chr16:30950614(+) A-I      intronic chr16:30950756(+) A-I      intronic chr16:30950796(+) A-I      intronic chr16:30950828(+) A-I      intronic chr16:30944792(+) A-I      intronic chr16:30944871(+) A-I      intronic chr16:30945019(+) A-I      intronic chr16:30945203(+) A-I      intronic chr16:30956974(+) A-I      intronic chr16:30957043(+) A-I      intronic chr16:30956810(+) A-I      intronic chr16:30945335(+) A-I      intronic chr16:30945430(+) A-I      intronic chr16:30945542(+) A-I      intronic chr16:30945573(+) A-I      intronic chr16:30945588(+) A-I      intronic chr16:30949634(+) A-I      intronic chr16:30956785(+) A-I      intronic chr16:30956719(+) A-I      intronic chr16:30951416(+) A-I      intronic chr16:30943193(+) A-I      intronic chr16:30943336(+) A-I      intronic chr16:30945662(+) A-I      intronic chr16:30948083(+) A-I      intronic chr16:30948254(+) A-I      intronic chr16:30949580(+) A-I      intronic chr16:30949639(+) A-I      intronic chr16:30951306(+) A-I      intronic chr16:30951291(+) A-I      intronic chr16:30949685(+) A-I      intronic chr16:30950062(+) A-I      intronic chr16:30951290(+) A-I      intronic chr16:30951001(+) A-I      intronic chr16:30943079(+) A-I      intronic chr16:30943189(+) A-I      intronic chr16:30954584(+) A-I      intronic chr16:30945177(+) A-I      intronic chr16:30944262(+) A-I      intronic chr16:30951634(+) A-I      intronic chr16:30956863(+) A-I      intronic chr16:30945900(+) A-I      intronic chr16:30949679(+) A-I      intronic chr16:30957710(+) A-I      intronic chr16:30954590(+) A-I      intronic chr16:30944287(+) A-I      intronic chr16:30949686(+) A-I      intronic chr16:30952153(+) A-I      intronic chr16:30944994(+) A-I      intronic chr16:30955039(+) A-I      intronic chr16:30950599(+) A-I      intronic chr16:30957124(+) A-I      intronic chr16:30944301(+) A-I      intronic chr16:30945613(+) A-I      intronic chr16:30944399(+) A-I      intronic chr16:30945046(+) A-I      intronic chr16:30950921(+) A-I      intronic chr16:30952694(+) A-I      intronic chr16:30956725(+) A-I      intronic chr16:30952611(+) A-I      intronic chr16:30945334(+) A-I      intronic chr16:30952658(+) A-I      intronic chr16:30945645(+) A-I      intronic chr16:30950161(+) A-I      intronic chr16:30957800(+) A-I      intronic chr16:30957038(+) A-I      intronic chr16:30957624(+) A-I      intronic chr16:30945173(+) A-I      intronic chr16:30949666(+) A-I      intronic chr16:30945928(+) A-I      intronic chr16:30949650(+) A-I      intronic chr16:30952650(+) A-I      intronic chr16:30944936(+) A-I      intronic chr16:30952087(+) A-I      intronic chr16:30945858(+) A-I      intronic chr16:30952088(+) A-I      intronic chr16:30956855(+) A-I      intronic chr16:30945497(+) A-I      intronic chr16:30950946(+) A-I      intronic chr16:30952651(+) A-I      intronic chr16:30951706(+) A-I      intronic chr16:30949654(+) A-I      intronic chr16:30945967(+) A-I      intronic chr16:30945424(+) A-I      intronic chr16:30952068(+) A-I      intronic chr16:30952686(+) A-I      intronic chr16:30943177(+) A-I      intronic chr16:30945564(+) A-I      intronic chr16:30954969(+) A-I      intronic chr16:30943296(+) A-I      intronic chr16:30951559(+) A-I      intronic chr16:30951346(+) A-I      intronic chr16:30945213(+) A-I      intronic chr16:30952542(+) A-I      intronic chr16:30944900(+) A-I      intronic chr16:30951499(+) A-I      intronic chr16:30943127(+) A-I      intronic chr16:30957111(+) A-I      intronic chr16:30955098(+) A-I      intronic chr16:30950986(+) A-I      intronic chr16:30945832(+) A-I      intronic chr16:30945868(+) A-I      intronic chr16:30956919(+) A-I      intronic chr16:30945558(+) A-I      intronic chr16:30944304(+) A-I      intronic chr16:30952201(+) A-I      intronic chr16:30945351(+) A-I      intronic chr16:30945103(+) A-I      intronic chr16:30951647(+) A-I      intronic chr16:30952264(+) A-I      intronic chr16:30952710(+) A-I      intronic chr16:30950139(+) A-I      intronic chr16:30956904(+) A-I      intronic chr16:30945007(+) A-I      intronic chr16:30956905(+) A-I      intronic chr16:30945899(+) A-I      intronic chr16:30951725(+) A-I      intronic chr16:30955086(+) A-I      intronic chr16:30945336(+) A-I      intronic chr16:30944937(+) A-I      intronic chr16:30945929(+) A-I      intronic chr16:30945521(+) A-I      intronic chr16:30952032(+) A-I      intronic chr16:30956964(+) A-I      intronic chr16:30956869(+) A-I      intronic chr16:30945034(+) A-I      intronic chr16:30950164(+) A-I      intronic chr16:30945640(+) A-I      intronic chr16:30945348(+) A-I      intronic chr16:30956726(+) A-I      intronic chr16:30952606(+) A-I      intronic chr16:30950231(+) A-I      intronic chr16:30956827(+) A-I      intronic chr16:30952251(+) A-I      intronic chr16:30952229(+) A-I      intronic chr16:30951491(+) A-I      intronic chr16:30956805(+) A-I      intronic chr16:30944422(+) A-I      intronic chr16:30943066(+) A-I      intronic chr16:30944279(+) A-I      intronic chr16:30957586(+) A-I      intronic chr16:30950519(+) A-I      intronic chr16:30951528(+) A-I      intronic chr16:30948193(+) A-I      intronic chr16:30945117(+) A-I      intronic chr16:30949581(+) A-I      intronic chr16:30952654(+) A-I      intronic chr16:30944977(+) A-I      intronic chr16:30945431(+) A-I      intronic chr16:30957708(+) A-I      intronic chr16:30943178(+) A-I      intronic chr16:30951420(+) A-I      intronic chr16:30945092(+) A-I      intronic chr16:30949807(+) A-I      intronic chr16:30951459(+) A-I      intronic chr16:30951620(+) A-I      intronic chr16:30945408(+) A-I      intronic chr16:30957714(+) A-I      intronic chr16:30945151(+) A-I      intronic chr16:30952771(+) A-I      intronic chr16:30943067(+) A-I      intronic chr16:30952163(+) A-I      intronic chr16:30951583(+) A-I      intronic chr16:30949635(+) A-I      intronic chr16:30952007(+) A-I      intronic chr16:30936323(+) A-I      intronic chr16:30952237(+) A-I      intronic chr16:30957740(+) A-I      intronic chr16:30957715(+) A-I      intronic chr16:30952726(+) A-I      intronic chr16:30957664(+) A-I      intronic chr16:30951728(+) A-I      intronic chr16:30952528(+) A-I      intronic chr16:30951392(+) A-I      intronic chr16:30951666(+) A-I      intronic chr16:30952615(+) A-I      intronic chr16:30949493(+) A-I      intronic chr16:30945538(+) A-I      intronic chr16:30952568(+) A-I      intronic chr16:30949695(+) A-I      intronic chr16:30952121(+) A-I      intronic chr16:30949734(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	FBXL19	chr16:30943132(+) C-T intron -    22484847 chr16:30943177(+) A-G intron -    22484847 chr16:30945900(+) A-G intron -    22484847 chr16:30945967(+) A-G intron -    22484847 chr16:30952651(+) A-G intron -    22484847 chr16:30952654(+) A-G intron -    22484847 chr16:30952694(+) A-G intron -    22484847 chr16:30952726(+) A-G intron -    22484847 chr16:30957111(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FBXL19	chr16:30934456-30934457(+) m6A 5'UTR       24284625//25456834//24981863//27371828//22608085 chr16:30935432-30935433(+) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//22608085 chr16:30935438-30935439(+) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//22608085 chr16:30935445-30935446(+) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//22608085 chr16:30935518-30935519(+) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr16:30935538-30935539(+) m6A 5'UTR//intron       24209618//25456834//24981863//22608085 chr16:30935664-30935665(+) m6A 5'UTR//intron       24209618//25456834 chr16:30935769-30935770(+) m6A 5'UTR//intron       24209618 chr16:30935897-30935898(+) m6A 5'UTR//intron       24209618 chr16:30935941-30935942(+) m6A 5'UTR//intron       24209618 chr16:30935959-30935960(+) m6A 5'UTR//intron       24209618 chr16:30937123-30937124(+) m6A 5'UTR//CDS       24209618 chr16:30937156-30937157(+) m6A 5'UTR//CDS       24284625//24209618 chr16:30937187-30937188(+) m6A 5'UTR//CDS       24284625//24209618 chr16:30937195-30937196(+) m1A 5'UTR//CDS       26863196//26863410 chr16:30938683-30938684(+) m6A 5'UTR//CDS       24284625//24209618 chr16:30939817-30939818(+) m1A 5'UTR//CDS       26863410//26863196 chr16:30939854-30939855(+) m6A 5'UTR//CDS//intron       - chr16:30939941-30939942(+) m6A 5'UTR//CDS//intron       24284625 chr16:30941395-30941396(+) m6A 5'UTR//CDS       24284625 chr16:30941529-30941530(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30941535-30941536(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30941640-30941641(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30941891-30941892(+) m6A CDS       24284625 chr16:30953468-30953469(+) m6A CDS       24284625 chr16:30953540-30953541(+) m6A CDS       24284625 chr16:30953551-30953552(+) m6A CDS       24284625 chr16:30953588-30953589(+) m6A CDS       24284625 chr16:30953782-30953783(+) m6A CDS       24284625 chr16:30953809-30953810(+) m6A CDS       24284625 chr16:30953845-30953846(+) m6A CDS       24284625 chr16:30953852-30953853(+) m6A CDS       24284625 chr16:30958055-30958056(+) m6A CDS//intron       24284625 chr16:30958090-30958091(+) m6A CDS//intron       24284625 chr16:30958170-30958171(+) m6A CDS       24284625 chr16:30958197-30958198(+) m6A CDS       24284625//24209618 chr16:30958244-30958245(+) m6A CDS       24284625//24209618//24981863 chr16:30958390-30958391(+) m6A CDS//intron       24284625//24209618//24981863 chr16:30958438-30958439(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960 chr16:30958543-30958544(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30958576-30958577(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30958593-30958594(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30958689-30958690(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30958886-30958887(+) m6A 3'UTR//intron       24284625//25456834//24981863 chr16:30958947-30958948(+) m6A 3'UTR//intron       24284625//25456834//24981863 chr16:30958954-30958955(+) m6A 3'UTR//intron       24284625//25456834//24981863 chr16:30958973-30958974(+) m6A 3'UTR//intron       24284625//25456834//24981863 chr16:30958979-30958980(+) m6A 3'UTR//intron       24284625//25456834//24981863 chr16:30959025-30959026(+) m6A 3'UTR//intron       24284625//25456834//24981863 chr16:30959067-30959068(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863 chr16:30959120-30959121(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr16:30959328-30959329(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30959357-30959358(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30959373-30959374(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30959399-30959400(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30959404-30959405(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30959414-30959415(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30959420-30959421(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:30959427-30959428(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:30959453-30959454(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:30959511-30959512(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:30959550-30959551(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:30959558-30959559(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:30959601-30959602(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:30959625-30959626(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:30959664-30959665(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:30959721-30959722(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:30959733-30959734(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:30959788-30959789(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30959928-30959929(+) m6A 3'UTR       24284625//25456834//24981863 chr16:30960027-30960028(+) m6A 3'UTR       24284625//25456834//24981863 chr16:30960083-30960084(+) m6A 3'UTR       24284625//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H25	Exosome K562 cells     24460325
	FBXL19	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H25
Interactor2: FBXL19

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg