Detail Information

Basic Information:


  VIRBase ID:  

VHID00197708

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H25:           MCF2L2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H25 MCF2L2
miRBase
Accession/Entrez ID		 MIMAT0014708 23101
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - ARHGEF22

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR MCF2L2
chr3:183122551(-) A-I      intronic
chr3:183134647(-) A-I      intronic
chr3:183135864(-) A-I      intronic
chr3:183138183(-) A-I      intronic
chr3:183138196(-) A-I      intronic
chr3:183138203(-) A-I      intronic
chr3:183138237(-) A-I      intronic
chr3:183138238(-) A-I      intronic
chr3:183138264(-) A-I      intronic
chr3:183138274(-) A-I      intronic
chr3:183138303(-) A-I      intronic
chr3:183138304(-) A-I      intronic
chr3:183143595(-) A-I      intronic
chr3:183143621(-) A-I      intronic
chr3:183143631(-) A-I      intronic
chr3:183143648(-) A-I      intronic
chr3:183143742(-) A-I      intronic
chr3:182906070(-) A-I      intronic
chr3:182906062(-) A-I      intronic
chr3:182906057(-) A-I      intronic
chr3:182906052(-) A-I      intronic
chr3:183134663(-) A-I      intronic
chr3:182995510(-) A-I      intronic
chr3:182995509(-) A-I      intronic
chr3:182995504(-) A-I      intronic
chr3:182995494(-) A-I      intronic
chr3:182995486(-) A-I      intronic
chr3:182995464(-) A-I      intronic
chr3:182934478(-) A-I      intronic
chr3:182934469(-) A-I      intronic
chr3:182934428(-) A-I      intronic
chr3:182934420(-) A-I      intronic
chr3:182934404(-) A-I      intronic
chr3:182904597(-) A-I      intronic
chr3:182911146(-) A-I      intronic
chr3:182911321(-) A-I      intronic
chr3:182927550(-) A-I      intronic
chr3:182958093(-) A-I      intronic
chr3:182958166(-) A-I      intronic
chr3:182991792(-) A-I      intronic
chr3:182991835(-) A-I      intronic
chr3:182995495(-) A-I      intronic
chr3:182995518(-) A-I      intronic
chr3:182998514(-) A-I      intronic
chr3:182998554(-) A-I      intronic
chr3:182998574(-) A-I      intronic
chr3:183008587(-) A-I      intronic
chr3:183008592(-) A-I      intronic
chr3:183055079(-) A-I      intronic
chr3:183055088(-) A-I      intronic
chr3:183055165(-) A-I      intronic
chr3:183089371(-) A-I      intronic
chr3:183090433(-) A-I      intronic
chr3:183122535(-) A-I      intronic
chr3:182993654(-) A-I      intronic
chr3:183096585(-) A-I      intronic
chr3:183061328(-) A-I      intronic
chr3:182904352(-) A-I      intronic
chr3:183141516(-) A-I      intronic
chr3:183089503(-) A-I      intronic
chr3:182958256(-) A-I      intronic
chr3:183070224(-) A-I      intronic
chr3:183123681(-) A-I      intronic
chr3:182937154(-) A-I      intronic
chr3:182991920(-) A-I      intronic
chr3:182911277(-) A-I      intronic
chr3:183096614(-) A-I      intronic
chr3:182904541(-) A-I      intronic
chr3:183096595(-) A-I      intronic
chr3:183101119(-) A-I      intronic
chr3:182904250(-) A-I      intronic
chr3:183080072(-) A-I      intronic
chr3:182956529(-) A-I      intronic
chr3:182934825(-) A-I      intronic
chr3:182936259(-) A-I      intronic
chr3:183122575(-) A-I      intronic
chr3:182927405(-) A-I      intronic
chr3:182902032(-) A-I      intronic
chr3:183070304(-) A-I      intronic
chr3:183022284(-) A-I      intronic
chr3:182998553(-) A-I      intronic
chr3:183138286(-) A-I      intronic
chr3:182896146(-) A-I      3'UTR
chr3:182934571(-) A-I      intronic
chr3:182911267(-) A-I      intronic
chr3:182991951(-) A-I      intronic
chr3:183108505(-) A-I      intronic
chr3:182958249(-) A-I      intronic
chr3:182999751(-) A-I      intronic
chr3:182991786(-) A-I      intronic
chr3:182968204(-) A-I      intronic
chr3:182993530(-) A-I      intronic
chr3:182935253(-) A-I      intronic
chr3:182904439(-) A-I      intronic
chr3:182904349(-) A-I      intronic
chr3:183138222(-) A-I      intronic
chr3:183061390(-) A-I      intronic
chr3:183138229(-) A-I      intronic
chr3:182991881(-) A-I      intronic
chr3:182904269(-) A-I      intronic
chr3:182904158(-) A-I      intronic
chr3:183032691(-) A-I      intronic
chr3:183033011(-) A-I      intronic
chr3:183138145(-) A-I      intronic
chr3:183074255(-) A-I      intronic
chr3:183080069(-) A-I      intronic
chr3:182908766(-) A-I      intronic
chr3:183073307(-) A-I      intronic
chr3:182902043(-) A-I      intronic
chr3:182939876(-) A-I      intronic
chr3:182991837(-) A-I      intronic
chr3:182956118(-) A-I      intronic
chr3:182902077(-) A-I      intronic
chr3:183096639(-) A-I      intronic
chr3:182993631(-) A-I      intronic
chr3:183089538(-) A-I      intronic
chr3:182902829(-) A-I      intronic
chr3:182904180(-) A-I      intronic
chr3:182956180(-) A-I      intronic
chr3:183127475(-) A-I      intronic
chr3:182999745(-) A-I      intronic
chr3:182904415(-) A-I      intronic
chr3:182991891(-) A-I      intronic
chr3:182993494(-) A-I      intronic
chr3:182991927(-) A-I      intronic
chr3:182999743(-) A-I      intronic
chr3:182924403(-) A-I      intronic
chr3:182906751(-) A-I      intronic
chr3:182995807(-) A-I      intronic
chr3:183138133(-) A-I      intronic
chr3:182991921(-) A-I      intronic
chr3:182906634(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED MCF2L2
chr3:183096555(-) A-I intron -    15342557
chr3:183096585(-) A-I intron -    15342557
chr3:183096595(-) A-I intron -    15342557
chr3:183096614(-) A-I intron -    15342557
chr3:183096639(-) A-I intron -    15342557
chr3:183107501(-) A-I exon CDS    15342557
chr3:182993526(-) A-G intron -    22484847
chr3:182993603(-) A-G intron -    22484847
chr3:182995807(-) A-G intron -    22484847
chr3:182998553(-) A-G intron -    22484847
chr3:183101119(-) A-G intron -    22484847
chr3:183122575(-) A-G intron -    22484847
chr3:183138133(-) A-G intron -    22484847
chr3:183138145(-) A-G intron -    22484847
chr3:183138222(-) A-G intron -    22484847
chr3:183138229(-) A-G intron -    22484847
chr3:183138286(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MCF2L2
chr3:182896973-182896974(-) m6A 3'UTR       27773536
chr3:182897039-182897040(-) m6A 3'UTR       25456834//27773536
chr3:182897343-182897344(-) m6A 3'UTR//exon//intron       25456834
chr3:183014902-183014903(-) m6A CDS//exon       -
chr3:183145809-183145810(-) m6A 5'UTR//intron       25456834//27371828//27773536
chr3:183145905-183145906(-) m6A 5'UTR//intron       25456834//27371828//27773536//22608085
chr3:183145969-183145970(-) m6A 5'UTR//intron       25456834//27371828//27773536//22608085
chr3:183146430-183146431(-) m6A 5'UTR       27773536
chr3:183146459-183146460(-) m6A 5'UTR       27773536
chr3:183146489-183146490(-) m6A 5'UTR       27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsv2-miR-H25
Exosome K562 cells     24460325
MCF2L2
Chromatin K562 cells     -
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytosol K562 cells     -
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H25
Interactor2: MCF2L2

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid//Targetscan
Support Database VmiReg

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