Basic Information:

  VIRBase ID:  

VHID00197678

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H25:  MIMAT0014708          CERS1:  NM_001387445     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H25	CERS1
miRBase Accession/Entrez ID	MIMAT0014708	10715
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	EPM8//GDF-1//GDF1//LAG1//LASS1//UOG1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CERS1	chr19:18979436-18979437(-) m6A 3'UTR//CDS       - chr19:18980113-18980114(-) m6A 3'UTR//CDS       - chr19:18980142-18980143(-) m6A 3'UTR//CDS       24209618//27773536 chr19:18980796-18980797(-) m6A 3'UTR//CDS       27773536 chr19:18980817-18980818(-) m6A 3'UTR//CDS       27773536 chr19:18980896-18980897(-) m6A 3'UTR//CDS       25456834//27371828//27773536 chr19:18980907-18980908(-) m6A 3'UTR//CDS       25456834//27371828//27773536 chr19:18980984-18980985(-) m6A 3'UTR//CDS       25456834//27371828//27773536 chr19:18981151-18981152(-) m6A 3'UTR//5'UTR       24209618//25456834//27773536 chr19:18981194-18981195(-) m6A 3'UTR//5'UTR       24209618//25456834//27773536 chr19:18981212-18981213(-) m6A 3'UTR//5'UTR       25456834 chr19:18981259-18981260(-) m6A 3'UTR//5'UTR       25456834 chr19:18981361-18981362(-) m6A 3'UTR//5'UTR       - chr19:18981384-18981385(-) m6A 3'UTR//5'UTR       - chr19:18981398-18981399(-) m6A 5'UTR//CDS       - chr19:18988748-18988749(-) m6A 3'UTR//intron       - chr19:18988779-18988780(-) m6A 3'UTR//intron       - chr19:18988805-18988806(-) m6A 3'UTR//intron       - chr19:18988849-18988850(-) m6A 3'UTR//CDS//intron       - chr19:18989074-18989075(-) m6A 3'UTR//intron       24209618//27773536 chr19:18989216-18989217(-) m6A 3'UTR//intron       25456834//27773536 chr19:18989241-18989242(-) m6A 3'UTR//intron       25456834//27371828//27773536 chr19:18989287-18989288(-) m6A 3'UTR//intron       25456834//27773536 chr19:18989310-18989311(-) m6A 3'UTR//intron       25456834//27773536 chr19:18989481-18989482(-) m6A 3'UTR//intron       24209618//25456834//24981863//27371828//22608085 chr19:18989551-18989552(-) m6A 3'UTR//intron       24209618//25456834//24981863//27773535//27371828//22608085 chr19:18989556-18989557(-) m6A 3'UTR//intron       24209618//25456834//24981863//27773535//27371828//22608085 chr19:18989598-18989599(-) m6A 3'UTR//intron       24209618//25456834//24981863//27773535//27371828//22608085 chr19:18989604-18989605(-) m6A 3'UTR//intron       24209618//25456834//24981863//27773535//27371828//22608085 chr19:18989657-18989658(-) m6A 3'UTR//intron       24209618//25456834//24981863//27773535//27371828//22608085 chr19:19006765-19006766(-) m6A 5'UTR//CDS//intron       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H25	Exosome K562 cells     24460325
	CERS1	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H25
Interactor2: CERS1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg