Basic Information:

  VIRBase ID:  

VHID00197038

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H24:  MIMAT0014707          FAM207A:  NM_001316983     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H24	FAM207A
miRBase Accession/Entrez ID	MIMAT0014707	85395
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C21orf70//PRED56

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FAM207A	chr21:46375492(+) A-I      intronic chr21:46375063(+) A-I      intronic chr21:46375494(+) A-I      intronic chr21:46375010(+) A-I      intronic chr21:46375510(+) A-I      intronic chr21:46375470(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FAM207A	chr21:46363634-46363635(+) m6A CDS       24284625//24209618 chr21:46363644-46363645(+) m6A CDS       24284625//24209618 chr21:46378188-46378189(+) m6A exon//intron       24284625//24209618//24981863 chr21:46380028-46380029(+) m6A CDS//exon       24284625//24209618//24981863 chr21:46386964-46386965(+) m6A CDS//exon       24284625//24209618//24981863 chr21:46387023-46387024(+) m6A CDS//exon       24284625//24209618//24981863 chr21:46389050-46389051(+) m6A CDS//intron       24284625//24209618 chr21:46393168-46393169(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22608085 chr21:46396607-46396608(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr21:46396750-46396751(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr21:46396789-46396790(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr21:46396858-46396859(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FAM207A	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H24
Interactor2: FAM207A

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg