Detail Information

Basic Information:


  VIRBase ID:  

VHID00195808

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-3p:           DTHD1:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H23-3p DTHD1
miRBase
Accession/Entrez ID
MIMAT0014706 401124
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR DTHD1
chr4:36316218(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DTHD1
chr4:36335182-36335183(+) m6A exon//intron       -
chr4:36335266-36335267(+) m6A exon//intron       -
chr4:36335276-36335277(+) m6A exon//intron       -
chr4:36335294-36335295(+) m6A exon//intron       -
chr4:36335319-36335320(+) m6A exon//intron       -
chr4:36335327-36335328(+) m6A exon//intron       -
chr4:36335337-36335338(+) m6A exon//intron       -
chr4:36345235-36345236(+) m6A CDS//exon       -
chr4:36345243-36345244(+) m6A CDS//exon       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate DTHD1
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H23-3p
Interactor2: DTHD1

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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