Basic Information:

  VIRBase ID:  

VHID00195779

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-3p:  MIMAT0014706          LYRM9:  NM_001076680     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H23-3p	LYRM9
miRBase Accession/Entrez ID	MIMAT0014706	201229
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C17orf108//HSD24

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	LYRM9	chr17:26210576(-) A-I      intronic chr17:26210527(-) A-I      intronic chr17:26208073(-) A-I      intronic chr17:26210528(-) A-I      intronic chr17:26213787(-) A-I      intronic chr17:26213810(-) A-I      intronic chr17:26213839(-) A-I      intronic chr17:26212587(-) A-I      intronic chr17:26212675(-) A-I      intronic chr17:26212677(-) A-I      intronic chr17:26213681(-) A-I      intronic chr17:26213783(-) A-I      intronic chr17:26213866(-) A-I      intronic chr17:26218995(-) A-I      intronic chr17:26216513(-) A-I      intronic chr17:26210548(-) A-I      intronic chr17:26212571(-) A-I      intronic chr17:26219231(-) A-I      intronic chr17:26216527(-) A-I      intronic chr17:26212714(-) A-I      intronic chr17:26212532(-) A-I      intronic chr17:26216381(-) A-I      intronic chr17:26213804(-) A-I      intronic chr17:26210567(-) A-I      intronic chr17:26216419(-) A-I      intronic chr17:26219155(-) A-I      intronic chr17:26210643(-) A-I      intronic chr17:26213672(-) A-I      intronic chr17:26219183(-) A-I      intronic chr17:26216503(-) A-I      intronic chr17:26213743(-) A-I      intronic chr17:26216510(-) A-I      intronic chr17:26213860(-) A-I      intronic chr17:26212480(-) A-I      intronic chr17:26210496(-) A-I      intronic chr17:26212601(-) A-I      intronic chr17:26216566(-) A-I      intronic chr17:26219083(-) A-I      intronic chr17:26216529(-) A-I      intronic chr17:26213683(-) A-I      intronic chr17:26212565(-) A-I      intronic chr17:26213673(-) A-I      intronic chr17:26212533(-) A-I      intronic chr17:26212493(-) A-I      intronic chr17:26210471(-) A-I      intronic chr17:26219193(-) A-I      intronic chr17:26213816(-) A-I      intronic chr17:26216383(-) A-I      intronic chr17:26213711(-) A-I      intronic chr17:26210513(-) A-I      intronic chr17:26216401(-) A-I      intronic chr17:26216556(-) A-I      intronic chr17:26213800(-) A-I      intronic chr17:26212641(-) A-I      intronic chr17:26213809(-) A-I      intronic chr17:26212614(-) A-I      intronic chr17:26210473(-) A-I      intronic chr17:26219119(-) A-I      intronic chr17:26216509(-) A-I      intronic chr17:26212592(-) A-I      intronic chr17:26210552(-) A-I      intronic chr17:26212515(-) A-I      intronic chr17:26212519(-) A-I      intronic chr17:26210554(-) A-I      intronic chr17:26210593(-) A-I      intronic chr17:26210594(-) A-I      intronic chr17:26213845(-) A-I      intronic chr17:26210472(-) A-I      intronic chr17:26219152(-) A-I      intronic chr17:26213875(-) A-I      intronic chr17:26213909(-) A-I      intronic chr17:26212492(-) A-I      intronic chr17:26216512(-) A-I      intronic chr17:26218815(-) A-I      intronic chr17:26213836(-) A-I      intronic chr17:26212627(-) A-I      intronic chr17:26216604(-) A-I      intronic chr17:26213873(-) A-I      intronic chr17:26218991(-) A-I      intronic chr17:26210510(-) A-I      intronic chr17:26210607(-) A-I      intronic chr17:26216507(-) A-I      intronic chr17:26210425(-) A-I      intronic chr17:26208008(-) A-I      intronic chr17:26216471(-) A-I      intronic chr17:26213702(-) A-I      intronic chr17:26216462(-) A-I      intronic chr17:26216399(-) A-I      intronic chr17:26213682(-) A-I      intronic chr17:26216608(-) A-I      intronic chr17:26213703(-) A-I      intronic chr17:26213796(-) A-I      intronic chr17:26219151(-) A-I      intronic chr17:26219092(-) A-I      intronic chr17:26216511(-) A-I      intronic chr17:26212624(-) A-I      intronic chr17:26213710(-) A-I      intronic chr17:26216516(-) A-I      intronic chr17:26211131(-) A-I      intronic chr17:26210564(-) A-I      intronic chr17:26216498(-) A-I      intronic chr17:26219215(-) A-I      intronic chr17:26210629(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LYRM9	chr17:26205692-26205693(-) m6A 3'UTR       25456834 chr17:26205724-26205725(-) m6A 3'UTR       25456834 chr17:26209696-26209697(-) m6A CDS       24981863 chr17:26209735-26209736(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	LYRM9	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H23-3p
Interactor2: LYRM9

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg