Basic Information:

  VIRBase ID:  

VHID00195730

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-3p:  MIMAT0014706          EEPD1:  NM_030636     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H23-3p	EEPD1
miRBase Accession/Entrez ID	MIMAT0014706	80820
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HSPC107

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	EEPD1	chr7:36315268(+) A-I      intronic chr7:36315271(+) A-I      intronic chr7:36315291(+) A-I      intronic chr7:36329310(+) A-I      intronic chr7:36329325(+) A-I      intronic chr7:36205085(+) A-I      intronic chr7:36207498(+) A-I      intronic chr7:36212987(+) A-I      intronic chr7:36212988(+) A-I      intronic chr7:36267882(+) A-I      intronic chr7:36267936(+) A-I      intronic chr7:36333462(+) A-I      intronic chr7:36333493(+) A-I      intronic chr7:36333494(+) A-I      intronic chr7:36334549(+) A-I      intronic chr7:36334680(+) A-I      intronic chr7:36279771(+) A-I      intronic chr7:36279803(+) A-I      intronic chr7:36281220(+) A-I      intronic chr7:36281409(+) A-I      intronic chr7:36286551(+) A-I      intronic chr7:36286558(+) A-I      intronic chr7:36286559(+) A-I      intronic chr7:36286673(+) A-I      intronic chr7:36286689(+) A-I      intronic chr7:36287981(+) A-I      intronic chr7:36219944(+) A-I      intronic chr7:36334693(+) A-I      intronic chr7:36288036(+) A-I      intronic chr7:36291023(+) A-I      intronic chr7:36301875(+) A-I      intronic chr7:36334707(+) A-I      intronic chr7:36334708(+) A-I      intronic chr7:36335376(+) A-I      intronic chr7:36335382(+) A-I      intronic chr7:36335462(+) A-I      intronic chr7:36335475(+) A-I      intronic chr7:36335484(+) A-I      intronic chr7:36335493(+) A-I      intronic chr7:36302866(+) A-I      intronic chr7:36315156(+) A-I      intronic chr7:36315173(+) A-I      intronic chr7:36335497(+) A-I      intronic chr7:36335533(+) A-I      intronic chr7:36335565(+) A-I      intronic chr7:36335572(+) A-I      intronic chr7:36332217(+) A-I      intronic chr7:36315254(+) A-I      intronic chr7:36311591(+) A-I      intronic chr7:36311584(+) A-I      intronic chr7:36311555(+) A-I      intronic chr7:36307816(+) A-I      intronic chr7:36291193(+) A-I      intronic chr7:36290981(+) A-I      intronic chr7:36288050(+) A-I      intronic chr7:36287964(+) A-I      intronic chr7:36287878(+) A-I      intronic chr7:36280975(+) A-I      intronic chr7:36335480(+) A-I      intronic chr7:36286677(+) A-I      intronic chr7:36286682(+) A-I      intronic chr7:36335481(+) A-I      intronic chr7:36335489(+) A-I      intronic chr7:36335496(+) A-I      intronic chr7:36286700(+) A-I      intronic chr7:36335478(+) A-I      intronic chr7:36315182(+) A-I      intronic chr7:36315245(+) A-I      intronic chr7:36282317(+) A-I      intronic chr7:36332314(+) A-I      intronic chr7:36301826(+) A-I      intronic chr7:36279817(+) A-I      intronic chr7:36210584(+) A-I      intronic chr7:36287877(+) A-I      intronic chr7:36334627(+) A-I      intronic chr7:36289724(+) A-I      intronic chr7:36210794(+) A-I      intronic chr7:36311760(+) A-I      intronic chr7:36310825(+) A-I      intronic chr7:36282260(+) A-I      intronic chr7:36287972(+) A-I      intronic chr7:36329147(+) A-I      intronic chr7:36279793(+) A-I      intronic chr7:36311552(+) A-I      intronic chr7:36280985(+) A-I      intronic chr7:36315330(+) A-I      intronic chr7:36290976(+) A-I      intronic chr7:36334523(+) A-I      intronic chr7:36308987(+) A-I      intronic chr7:36299353(+) A-I      intronic chr7:36279668(+) A-I      intronic chr7:36289746(+) A-I      intronic chr7:36287954(+) A-I      intronic chr7:36315343(+) A-I      intronic chr7:36332326(+) A-I      intronic chr7:36332392(+) A-I      intronic chr7:36286520(+) A-I      intronic chr7:36289772(+) A-I      intronic chr7:36284818(+) A-I      intronic chr7:36315082(+) A-I      intronic chr7:36309021(+) A-I      intronic chr7:36277305(+) A-I      intronic chr7:36282354(+) A-I      intronic chr7:36332197(+) A-I      intronic chr7:36332150(+) A-I      intronic chr7:36332390(+) A-I      intronic chr7:36287932(+) A-I      intronic chr7:36210741(+) A-I      intronic chr7:36328101(+) A-I      intronic chr7:36287996(+) A-I      intronic chr7:36289780(+) A-I      intronic chr7:36219237(+) A-I      intronic chr7:36288025(+) A-I      intronic chr7:36203250(+) A-I      intronic chr7:36286756(+) A-I      intronic chr7:36301852(+) A-I      intronic chr7:36279731(+) A-I      intronic chr7:36287976(+) A-I      intronic chr7:36219228(+) A-I      intronic chr7:36287900(+) A-I      intronic chr7:36309263(+) A-I      intronic chr7:36274043(+) A-I      intronic chr7:36311547(+) A-I      intronic chr7:36335529(+) A-I      intronic chr7:36332144(+) A-I      intronic chr7:36332368(+) A-I      intronic chr7:36333452(+) A-I      intronic chr7:36310696(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	EEPD1	chr7:36332150(+) A-I intron -    15342557 chr7:36332278(+) A-I intron -    15342557 chr7:36332300(+) A-I intron -    15342557 chr7:36332314(+) A-I intron -    15342557 chr7:36332326(+) A-I intron -    15342557 chr7:36332368(+) A-I intron -    15342557 chr7:36332390(+) A-I intron -    15342557 chr7:36332392(+) A-I intron -    15342557

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	EEPD1	chr7:36192863-36192864(+) m6A 5'UTR       25456834//24981863 chr7:36192919-36192920(+) m6A 5'UTR       24981863 chr7:36192957-36192958(+) m6A 5'UTR       24981863 chr7:36193930-36193931(+) m6A 5'UTR       24284625//24981863//22608085 chr7:36193973-36193974(+) m6A CDS       24284625//24981863//22608085 chr7:36193982-36193983(+) m6A CDS       24284625//24981863//22608085 chr7:36194168-36194169(+) m6A CDS       24284625//25456834//24981863 chr7:36194282-36194283(+) m6A CDS       24284625//25456834//24981863//22608085 chr7:36194420-36194421(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:36194459-36194460(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:36194498-36194499(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:36194562-36194563(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr7:36194621-36194622(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr7:36194627-36194628(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr7:36194732-36194733(+) m6A CDS       24284625//25456834//24981863//22608085 chr7:36194807-36194808(+) m6A CDS       24284625//24209618//25456834//22608085 chr7:36278617-36278618(+) m6A CDS       24284625//25456834//22608085 chr7:36320739-36320740(+) m6A CDS//exon       - chr7:36336646-36336647(+) m6A CDS//exon       24981863 chr7:36336730-36336731(+) m6A CDS//exon       24981863 chr7:36336754-36336755(+) m6A CDS//exon       24981863 chr7:36338648-36338649(+) m6A CDS//exon//intron       24284625//25456834//24981863//22608085 chr7:36338694-36338695(+) m6A CDS//exon//intron       24284625//25456834//24981863//22608085 chr7:36338732-36338733(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//22608085 chr7:36338844-36338845(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr7:36338965-36338966(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr7:36338975-36338976(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr7:36339031-36339032(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr7:36339074-36339075(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr7:36339127-36339128(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr7:36339320-36339321(+) m6A 3'UTR       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	EEPD1	Cytosol HCC cell line (HepG2)     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H23-3p
Interactor2: EEPD1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg