Basic Information:

  VIRBase ID:  

VHID00195440

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-5p:  MIMAT0014705          KIAA0895L:  NM_001369686     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H23-5p	KIAA0895L
miRBase Accession/Entrez ID	MIMAT0014705	653319
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	KIAA0895L	chr16:67214880(-) A-I      intronic chr16:67215996(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	KIAA0895L	chr16:67209695-67209696(-) m6A 3'UTR//exon       27773535 chr16:67209709-67209710(-) m6A 3'UTR//exon       27773535 chr16:67210068-67210069(-) m6A 3'UTR//exon//intron       27773535 chr16:67210073-67210074(-) m6A 3'UTR//exon//intron       27773535 chr16:67210654-67210655(-) m6A 3'UTR//exon       27371828 chr16:67210680-67210681(-) m6A 3'UTR//exon       24284625//27371828 chr16:67210801-67210802(-) m6A 3'UTR//CDS//exon       24981863 chr16:67212319-67212320(-) m6A CDS//exon       27773536 chr16:67212382-67212383(-) m6A CDS//exon       27773536 chr16:67212482-67212483(-) m6A exon//intron       - chr16:67212905-67212906(-) m6A exon//intron       24981863 chr16:67212931-67212932(-) m6A exon//intron       24981863 chr16:67212944-67212945(-) m6A exon//intron       24981863 chr16:67213018-67213019(-) m6A exon//intron       - chr16:67213409-67213410(-) m6A CDS//exon//intron       - chr16:67213442-67213443(-) m6A CDS//exon//intron       - chr16:67213813-67213814(-) m6A CDS//exon//intron       27773535 chr16:67213821-67213822(-) m6A CDS//exon//intron       27773535 chr16:67213958-67213959(-) m6A CDS//exon//intron       24981863 chr16:67214055-67214056(-) m6A CDS//exon//intron       24284625//25456834//24981863//27371828//22608085 chr16:67214067-67214068(-) m6A CDS//exon//intron       24284625//25456834//24981863//27773535//27371828//22608085 chr16:67214140-67214141(-) m6A CDS//exon//intron       24284625//25456834//24981863//27773535//27371828//22608085 chr16:67214193-67214194(-) m6A CDS//exon//intron       24284625//25456834//24981863//27371828//22608085 chr16:67214418-67214419(-) m6A CDS//intron       24284625//25456834//24981863//27371828 chr16:67214502-67214503(-) m6A CDS//intron       24284625//25456834//24981863//27773535//27371828//22608085 chr16:67214517-67214518(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr16:67217191-67217192(-) m6A 5'UTR//exon//intron       24981863//27773535//22608085 chr16:67217209-67217210(-) m6A 5'UTR//exon//intron       24981863//27773535//22608085 chr16:67217277-67217278(-) m6A 5'UTR//exon//intron       24284625//24981863//27773535//27371828//22608085 chr16:67217320-67217321(-) m6A 5'UTR//exon//intron       24284625//25456834//24981863//27773535//27371828//22608085 chr16:67217367-67217368(-) m6A 5'UTR//exon//intron       24284625//25456834//24981863//27773535//27371828//22608085 chr16:67217373-67217374(-) m6A 5'UTR//exon//intron       24284625//25456834//24981863//27773535//27371828//22608085 chr16:67217379-67217380(-) m6A 5'UTR//exon//intron       24284625//25456834//24981863//27773535//27371828//22608085 chr16:67217421-67217422(-) m6A 5'UTR//exon//intron       24284625//25456834//24981863//27773535//27371828//22608085 chr16:67217513-67217514(-) m6A 5'UTR//intron       27773535 chr16:67217750-67217751(-) m6A 5'UTR//intron       24981863//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	KIAA0895L	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H23-5p
Interactor2: KIAA0895L

Evidence Support:

Prediction-Evidence	miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg