Basic Information:

  VIRBase ID:  

VHID00195421

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-5p:  MIMAT0014705          NRARP:  NM_001004354     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H23-5p	NRARP
miRBase Accession/Entrez ID	MIMAT0014705	441478
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NRARP	chr9:140195417-140195418(-) m6A 3'UTR       24284625 chr9:140195482-140195483(-) m6A 3'UTR       22608085 chr9:140195504-140195505(-) Y 3'UTR       26075521 chr9:140195609-140195610(-) m6A 3'UTR       24284625//25456834//24981863//27773536//22575960//22608085 chr9:140195638-140195639(-) m6A 3'UTR       24284625//25456834//24981863//27773536//22575960//22608085 chr9:140196016-140196017(-) m6A 3'UTR       24284625//25456834//24981863//27773536//22608085 chr9:140196023-140196024(-) m6A 3'UTR       24284625//25456834//24981863//27773536//22608085 chr9:140196087-140196088(-) m6A CDS       24284625//25456834//24981863//27773536//22608085 chr9:140196246-140196247(-) m6A CDS       24284625//25456834//24981863//27773536//22575960//22608085 chr9:140196273-140196274(-) m6A CDS       24284625//25456834//24981863//27773536//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NRARP	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H23-5p
Interactor2: NRARP

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg