Basic Information:

  VIRBase ID:  

VHID00195374

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-5p:  MIMAT0014705          SLC27A1:  NM_198580     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H23-5p	SLC27A1
miRBase Accession/Entrez ID	MIMAT0014705	376497
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ACSVL5//FATP//FATP-1//FATP1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC27A1	chr19:17585585(+) A-I      intronic chr19:17614791(+) A-I      intronic chr19:17605846(+) A-I      intronic chr19:17604727(+) A-I      intronic chr19:17583510(+) A-I      intronic chr19:17583721(+) A-I      intronic chr19:17583859(+) A-I      intronic chr19:17601651(+) A-I      intronic chr19:17589575(+) A-I      intronic chr19:17588275(+) A-I      intronic chr19:17614803(+) A-I      intronic chr19:17589519(+) A-I      intronic chr19:17604724(+) A-I      intronic chr19:17604715(+) A-I      intronic chr19:17604696(+) A-I      intronic chr19:17604513(+) A-I      intronic chr19:17604224(+) A-I      intronic chr19:17604217(+) A-I      intronic chr19:17603410(+) A-I      intronic chr19:17603395(+) A-I      intronic chr19:17613628(+) A-I      intronic chr19:17603390(+) A-I      intronic chr19:17603385(+) A-I      intronic chr19:17603382(+) A-I      intronic chr19:17603375(+) A-I      intronic chr19:17603346(+) A-I      intronic chr19:17602511(+) A-I      intronic chr19:17601163(+) A-I      intronic chr19:17614829(+) A-I      intronic chr19:17591421(+) A-I      intronic chr19:17591416(+) A-I      intronic chr19:17614855(+) A-I      intronic chr19:17614859(+) A-I      intronic chr19:17614794(+) A-I      intronic chr19:17613612(+) A-I      intronic chr19:17613596(+) A-I      intronic chr19:17613595(+) A-I      intronic chr19:17612782(+) A-I      intronic chr19:17612765(+) A-I      intronic chr19:17591914(+) A-I      intronic chr19:17612760(+) A-I      intronic chr19:17612759(+) A-I      intronic chr19:17612737(+) A-I      intronic chr19:17610561(+) A-I      intronic chr19:17610543(+) A-I      intronic chr19:17610542(+) A-I      intronic chr19:17591434(+) A-I      intronic chr19:17591422(+) A-I      intronic chr19:17591407(+) A-I      intronic chr19:17610515(+) A-I      intronic chr19:17605881(+) A-I      intronic chr19:17582940(+) A-I      intronic chr19:17582954(+) A-I      intronic chr19:17604697(+) A-I      intronic chr19:17604656(+) A-I      intronic chr19:17604655(+) A-I      intronic chr19:17604644(+) A-I      intronic chr19:17604600(+) A-I      intronic chr19:17604595(+) A-I      intronic chr19:17604590(+) A-I      intronic chr19:17604533(+) A-I      intronic chr19:17604056(+) A-I      intronic chr19:17603728(+) A-I      intronic chr19:17603571(+) A-I      intronic chr19:17603561(+) A-I      intronic chr19:17603557(+) A-I      intronic chr19:17603508(+) A-I      intronic chr19:17603497(+) A-I      intronic chr19:17602524(+) A-I      intronic chr19:17602522(+) A-I      intronic chr19:17601939(+) A-I      intronic chr19:17601930(+) A-I      intronic chr19:17601916(+) A-I      intronic chr19:17601237(+) A-I      intronic chr19:17601183(+) A-I      intronic chr19:17600984(+) A-I      intronic chr19:17600980(+) A-I      intronic chr19:17596449(+) A-I      intronic chr19:17596365(+) A-I      intronic chr19:17596233(+) A-I      intronic chr19:17596164(+) A-I      intronic chr19:17593447(+) A-I      intronic chr19:17593313(+) A-I      intronic chr19:17593310(+) A-I      intronic chr19:17593309(+) A-I      intronic chr19:17593307(+) A-I      intronic chr19:17593284(+) A-I      intronic chr19:17593283(+) A-I      intronic chr19:17593177(+) A-I      intronic chr19:17593174(+) A-I      intronic chr19:17593172(+) A-I      intronic chr19:17590715(+) A-I      intronic chr19:17589666(+) A-I      intronic chr19:17589591(+) A-I      intronic chr19:17589555(+) A-I      intronic chr19:17589389(+) A-I      intronic chr19:17588720(+) A-I      intronic chr19:17588561(+) A-I      intronic chr19:17588528(+) A-I      intronic chr19:17588501(+) A-I      intronic chr19:17588491(+) A-I      intronic chr19:17588488(+) A-I      intronic chr19:17588296(+) A-I      intronic chr19:17588273(+) A-I      intronic chr19:17588236(+) A-I      intronic chr19:17588203(+) A-I      intronic chr19:17588142(+) A-I      intronic chr19:17588135(+) A-I      intronic chr19:17587959(+) A-I      intronic chr19:17587824(+) A-I      intronic chr19:17587801(+) A-I      intronic chr19:17587778(+) A-I      intronic chr19:17587777(+) A-I      intronic chr19:17587753(+) A-I      intronic chr19:17586278(+) A-I      intronic chr19:17586277(+) A-I      intronic chr19:17586264(+) A-I      intronic chr19:17586149(+) A-I      intronic chr19:17585984(+) A-I      intronic chr19:17585953(+) A-I      intronic chr19:17585945(+) A-I      intronic chr19:17585944(+) A-I      intronic chr19:17585898(+) A-I      intronic chr19:17585853(+) A-I      intronic chr19:17585817(+) A-I      intronic chr19:17585713(+) A-I      intronic chr19:17585700(+) A-I      intronic chr19:17585673(+) A-I      intronic chr19:17585544(+) A-I      intronic chr19:17585533(+) A-I      intronic chr19:17584988(+) A-I      intronic chr19:17584783(+) A-I      intronic chr19:17584551(+) A-I      intronic chr19:17583533(+) A-I      intronic chr19:17583502(+) A-I      intronic chr19:17583453(+) A-I      intronic chr19:17583110(+) A-I      intronic chr19:17583002(+) A-I      intronic chr19:17583000(+) A-I      intronic chr19:17582984(+) A-I      intronic chr19:17596099(+) A-I      intronic chr19:17603285(+) A-I      intronic chr19:17596405(+) A-I      intronic chr19:17596567(+) A-I      intronic chr19:17603475(+) A-I      intronic chr19:17596535(+) A-I      intronic chr19:17583475(+) A-I      intronic chr19:17583574(+) A-I      intronic chr19:17596524(+) A-I      intronic chr19:17586160(+) A-I      intronic chr19:17583037(+) A-I      intronic chr19:17596512(+) A-I      intronic chr19:17604573(+) A-I      intronic chr19:17587292(+) A-I      intronic chr19:17596545(+) A-I      intronic chr19:17605934(+) A-I      intronic chr19:17596550(+) A-I      intronic chr19:17595293(+) A-I      intronic chr19:17596483(+) A-I      intronic chr19:17601582(+) A-I      intronic chr19:17596443(+) A-I      intronic chr19:17603302(+) A-I      intronic chr19:17602443(+) A-I      intronic chr19:17596487(+) A-I      intronic chr19:17584853(+) A-I      intronic chr19:17604041(+) A-I      intronic chr19:17601906(+) A-I      intronic chr19:17583519(+) A-I      intronic chr19:17596478(+) A-I      intronic chr19:17589826(+) A-I      intronic chr19:17601025(+) A-I      intronic chr19:17583883(+) A-I      intronic chr19:17605276(+) A-I      intronic chr19:17593169(+) A-I      intronic chr19:17593401(+) A-I      intronic chr19:17606171(+) A-I      intronic chr19:17596452(+) A-I      intronic chr19:17585933(+) A-I      intronic chr19:17603491(+) A-I      intronic chr19:17601100(+) A-I      intronic chr19:17596518(+) A-I      intronic chr19:17596438(+) A-I      intronic chr19:17592546(+) A-I      intronic chr19:17596389(+) A-I      intronic chr19:17591839(+) A-I      intronic chr19:17596462(+) A-I      intronic chr19:17596432(+) A-I      intronic chr19:17583075(+) A-I      intronic chr19:17596477(+) A-I      intronic chr19:17590473(+) A-I      intronic chr19:17596463(+) A-I      intronic chr19:17588758(+) A-I      intronic chr19:17591791(+) A-I      intronic chr19:17603751(+) A-I      intronic chr19:17601090(+) A-I      intronic chr19:17604182(+) A-I      intronic chr19:17592413(+) A-I      intronic chr19:17596458(+) A-I      intronic chr19:17595127(+) A-I      intronic chr19:17596098(+) A-I      intronic chr19:17603811(+) A-I      intronic chr19:17585021(+) A-I      intronic chr19:17601612(+) A-I      intronic chr19:17602662(+) A-I      intronic chr19:17599048(+) A-I      intronic chr19:17591448(+) A-I      intronic chr19:17588725(+) A-I      intronic chr19:17586140(+) A-I      intronic chr19:17583050(+) A-I      intronic chr19:17584620(+) A-I      intronic chr19:17603739(+) A-I      intronic chr19:17596429(+) A-I      intronic chr19:17604197(+) A-I      intronic chr19:17591874(+) A-I      intronic chr19:17592226(+) A-I      intronic chr19:17602671(+) A-I      intronic chr19:17583049(+) A-I      intronic chr19:17601679(+) A-I      intronic chr19:17589857(+) A-I      intronic chr19:17589411(+) A-I      intronic chr19:17605937(+) A-I      intronic chr19:17583511(+) A-I      intronic chr19:17603353(+) A-I      intronic chr19:17596528(+) A-I      intronic chr19:17596558(+) A-I      intronic chr19:17593207(+) A-I      intronic chr19:17603632(+) A-I      intronic chr19:17596486(+) A-I      intronic chr19:17585841(+) A-I      intronic chr19:17602520(+) A-I      intronic chr19:17604187(+) A-I      intronic chr19:17596259(+) A-I      intronic chr19:17605967(+) A-I      intronic chr19:17588384(+) A-I      intronic chr19:17583053(+) A-I      intronic chr19:17604967(+) A-I      intronic chr19:17603532(+) A-I      intronic chr19:17602562(+) A-I      intronic chr19:17604563(+) A-I      intronic chr19:17604908(+) A-I      intronic chr19:17596488(+) A-I      intronic chr19:17585701(+) A-I      intronic chr19:17586154(+) A-I      intronic chr19:17593362(+) A-I      intronic chr19:17583716(+) A-I      intronic chr19:17604620(+) A-I      intronic chr19:17587169(+) A-I      intronic chr19:17584494(+) A-I      intronic chr19:17585579(+) A-I      intronic chr19:17605882(+) A-I      intronic chr19:17593414(+) A-I      intronic chr19:17588638(+) A-I      intronic chr19:17588426(+) A-I      intronic chr19:17583916(+) A-I      intronic chr19:17585952(+) A-I      intronic chr19:17584524(+) A-I      intronic chr19:17601717(+) A-I      intronic chr19:17602425(+) A-I      intronic chr19:17584878(+) A-I      intronic chr19:17604892(+) A-I      intronic chr19:17602499(+) A-I      intronic chr19:17596390(+) A-I      intronic chr19:17602472(+) A-I      intronic chr19:17583809(+) A-I      intronic chr19:17584975(+) A-I      intronic chr19:17589821(+) A-I      intronic chr19:17584891(+) A-I      intronic chr19:17590013(+) A-I      intronic chr19:17602410(+) A-I      intronic chr19:17601151(+) A-I      intronic chr19:17601681(+) A-I      intronic chr19:17586095(+) A-I      intronic chr19:17603852(+) A-I      intronic chr19:17601718(+) A-I      intronic chr19:17605921(+) A-I      intronic chr19:17589513(+) A-I      intronic chr19:17601638(+) A-I      intronic chr19:17585998(+) A-I      intronic chr19:17583854(+) A-I      intronic chr19:17589799(+) A-I      intronic chr19:17596128(+) A-I      intronic chr19:17583956(+) A-I      intronic chr19:17601087(+) A-I      intronic chr19:17586007(+) A-I      intronic chr19:17613607(+) A-I      intronic chr19:17584826(+) A-I      intronic chr19:17592452(+) A-I      intronic chr19:17603841(+) A-I      intronic chr19:17605974(+) A-I      intronic chr19:17601788(+) A-I      intronic chr19:17606058(+) A-I      intronic chr19:17601687(+) A-I      intronic chr19:17587297(+) A-I      intronic chr19:17601931(+) A-I      intronic chr19:17604687(+) A-I      intronic chr19:17603857(+) A-I      intronic chr19:17602608(+) A-I      intronic chr19:17605838(+) A-I      intronic chr19:17599047(+) A-I      intronic chr19:17604057(+) A-I      intronic chr19:17589021(+) A-I      intronic chr19:17584550(+) A-I      intronic chr19:17601011(+) A-I      intronic chr19:17601185(+) A-I      intronic chr19:17585958(+) A-I      intronic chr19:17603701(+) A-I      intronic chr19:17605908(+) A-I      intronic chr19:17588227(+) A-I      intronic chr19:17604139(+) A-I      intronic chr19:17601172(+) A-I      intronic chr19:17589020(+) A-I      intronic chr19:17603682(+) A-I      intronic chr19:17584475(+) A-I      intronic chr19:17591999(+) A-I      intronic chr19:17604618(+) A-I      intronic chr19:17604514(+) A-I      intronic chr19:17601559(+) A-I      intronic chr19:17583057(+) A-I      intronic chr19:17601217(+) A-I      intronic chr19:17601061(+) A-I      intronic chr19:17593381(+) A-I      intronic chr19:17601201(+) A-I      intronic chr19:17602616(+) A-I      intronic chr19:17584578(+) A-I      intronic chr19:17596492(+) A-I      intronic chr19:17583083(+) A-I      intronic chr19:17596541(+) A-I      intronic chr19:17605106(+) A-I      intronic chr19:17604534(+) A-I      intronic chr19:17586117(+) A-I      intronic chr19:17589508(+) A-I      intronic chr19:17596271(+) A-I      intronic chr19:17605319(+) A-I      intronic chr19:17583708(+) A-I      intronic chr19:17596103(+) A-I      intronic chr19:17583994(+) A-I      intronic chr19:17604122(+) A-I      intronic chr19:17592495(+) A-I      intronic chr19:17584461(+) A-I      intronic chr19:17589186(+) A-I      intronic chr19:17593393(+) A-I      intronic chr19:17605835(+) A-I      intronic chr19:17588713(+) A-I      intronic chr19:17591273(+) A-I      intronic chr19:17602409(+) A-I      intronic chr19:17596383(+) A-I      intronic chr19:17604902(+) A-I      intronic chr19:17588190(+) A-I      intronic chr19:17584634(+) A-I      intronic chr19:17604969(+) A-I      intronic chr19:17605840(+) A-I      intronic chr19:17583648(+) A-I      intronic chr19:17589586(+) A-I      intronic chr19:17586238(+) A-I      intronic chr19:17605039(+) A-I      intronic chr19:17592547(+) A-I      intronic chr19:17591908(+) A-I      intronic chr19:17588442(+) A-I      intronic chr19:17595321(+) A-I      intronic chr19:17603882(+) A-I      intronic chr19:17604632(+) A-I      intronic chr19:17605986(+) A-I      intronic chr19:17589965(+) A-I      intronic chr19:17585496(+) A-I      intronic chr19:17584621(+) A-I      intronic chr19:17584515(+) A-I      intronic chr19:17588785(+) A-I      intronic chr19:17604116(+) A-I      intronic chr19:17585824(+) A-I      intronic chr19:17588180(+) A-I      intronic chr19:17589812(+) A-I      intronic chr19:17592265(+) A-I      intronic chr19:17585519(+) A-I      intronic chr19:17601040(+) A-I      intronic chr19:17591455(+) A-I      intronic chr19:17596559(+) A-I      intronic chr19:17604059(+) A-I      intronic chr19:17585995(+) A-I      intronic chr19:17589226(+) A-I      intronic chr19:17586166(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SLC27A1	chr19:17606230(+) A-I intron -    15342557 chr19:17606290(+) A-I intron -    15342557 chr19:17606298(+) A-I intron -    15342557 chr19:17606352(+) A-I intron -    15342557 chr19:17607599(+) A-I intron -    15342557 chr19:17607631(+) A-I intron -    15342557 chr19:17607650(+) A-I intron -    15342557 chr19:17607658(+) A-I intron -    15342557 chr19:17607676(+) A-I intron -    15342557 chr19:17607742(+) A-I intron -    15342557 chr19:17607753(+) A-I intron -    15342557 chr19:17608642(+) A-I intron -    15258596   //21960545 chr19:17609098(+) A-I intron -    15258596 chr19:17609204(+) A-I intron -    15258596 chr19:17596405(+) A-I intron -    22028664 chr19:17596432(+) A-I intron -    22028664 chr19:17596438(+) A-I intron -    22028664 chr19:17596443(+) A-I intron -    22028664 chr19:17596452(+) A-I intron -    22028664 chr19:17596458(+) A-I intron -    22028664 chr19:17596462(+) A-I intron -    22028664 chr19:17596463(+) A-I intron -    22028664 chr19:17596477(+) A-I intron -    22028664 chr19:17596478(+) A-I intron -    22028664 chr19:17596483(+) A-I intron -    22028664 chr19:17596486(+) A-I intron -    22028664 chr19:17596487(+) A-I intron -    22028664 chr19:17596492(+) A-I intron -    22028664 chr19:17596512(+) A-I intron -    22028664 chr19:17596518(+) A-I intron -    22028664 chr19:17596524(+) A-I intron -    22028664 chr19:17596535(+) A-I intron -    22028664 chr19:17596541(+) A-I intron -    22028664 chr19:17596545(+) A-I intron -    22028664 chr19:17596550(+) A-I intron -    22028664 chr19:17596551(+) A-I intron -    22028664 chr19:17596558(+) A-I intron -    22028664 chr19:17589951(+) A-I intron -    21960545 chr19:17586238(+) A-G intron -    22484847 chr19:17586331(+) A-G intron -    22484847 chr19:17601146(+) A-G intron -    22484847 chr19:17602562(+) A-G intron -    22484847 chr19:17603521(+) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC27A1	chr19:17579610-17579611(+) m6A 5'UTR       - chr19:17579665-17579666(+) m6A 5'UTR       - chr19:17579730-17579731(+) m6A 5'UTR       - chr19:17597501-17597502(+) m6A 5'UTR//CDS//intron       - chr19:17597516-17597517(+) m6A 5'UTR//CDS//intron       - chr19:17597685-17597686(+) m6A 5'UTR//CDS//intron       24284625 chr19:17597799-17597800(+) m6A CDS//intron       24284625//25456834 chr19:17597806-17597807(+) m6A CDS//intron       24284625//25456834 chr19:17597975-17597976(+) m6A 3'UTR//CDS//intron       - chr19:17598039-17598040(+) m6A 3'UTR//CDS//intron       24284625 chr19:17598297-17598298(+) m6A 3'UTR//CDS       24284625 chr19:17608359-17608360(+) m6A 3'UTR//intron       25456834 chr19:17608368-17608369(+) m6A 3'UTR//intron       25456834 chr19:17608428-17608429(+) m6A 3'UTR//intron       25456834 chr19:17608451-17608452(+) m6A 3'UTR//intron       25456834 chr19:17611577-17611578(+) m6A CDS//exon//intron       - chr19:17615319-17615320(+) m6A CDS//exon       24284625 chr19:17615326-17615327(+) m6A CDS//exon       24284625 chr19:17615344-17615345(+) m6A CDS//exon       24284625//24981863 chr19:17615444-17615445(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr19:17615480-17615481(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr19:17615553-17615554(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr19:17615561-17615562(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr19:17615567-17615568(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr19:17615578-17615579(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr19:17616788-17616789(+) m6A 3'UTR//exon       24284625 chr19:17616894-17616895(+) m6A 3'UTR//exon       24284625//24981863 chr19:17616915-17616916(+) m6A 3'UTR//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC27A1	Chromatin K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H23-5p
Interactor2: SLC27A1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg