Basic Information:

  VIRBase ID:  

VHID00195341

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-5p:  MIMAT0014705          JMJD8:  NM_001323918     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H23-5p	JMJD8
miRBase Accession/Entrez ID	MIMAT0014705	339123
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C16orf20//PP14397

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	JMJD8	chr16:732586(-) A-I      3'UTR chr16:732597(-) A-I      3'UTR chr16:732599(-) A-I      3'UTR chr16:732602(-) A-I      3'UTR chr16:732612(-) A-I      3'UTR chr16:732628(-) A-I      3'UTR chr16:732638(-) A-I      3'UTR chr16:732620(-) A-I      3'UTR chr16:732639(-) A-I      3'UTR chr16:732640(-) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	JMJD8	chr16:731759-731760(-) m6A 3'UTR//exon       24284625//24981863//27773535 chr16:731908-731909(-) m6A 3'UTR//exon       24284625//27773535//27371828//27773536//22575960 chr16:731955-731956(-) m6A 3'UTR//exon       24284625//26404942//27773535//27773536//22575960 chr16:731986-731987(-) m6A 3'UTR//exon       24284625//26404942//27773535//27773536//22575960 chr16:732320-732321(-) m6A 3'UTR//exon       24284625//27773535//27773536//22575960 chr16:732491-732492(-) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr16:732516-732517(-) m6A 3'UTR//exon       24284625//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr16:732559-732560(-) m6A 3'UTR//exon       24284625//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr16:732565-732566(-) m6A 3'UTR//exon       24284625//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr16:732595-732596(-) m6A 3'UTR//exon       24284625//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr16:732618-732619(-) m6A 3'UTR//exon       24284625//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr16:732775-732776(-) m6A 3'UTR//exon       24284625//24981863//27773535//22575960//22608085 chr16:732787-732788(-) m6A 3'UTR//exon       24284625//24981863//27773535//22575960//22608085 chr16:733013-733014(-) m6A 3'UTR//CDS//exon//intron       24284625//27773535 chr16:733035-733036(-) m6A 3'UTR//CDS//exon//intron       24284625//27773535 chr16:733199-733200(-) m6A CDS//exon       24284625//27773535 chr16:733351-733352(-) m6A CDS//exon       24284625//27773535 chr16:733419-733420(-) m6A CDS//exon       24284625//27773535 chr16:733440-733441(-) m6A CDS//exon       24284625//27773535 chr16:733549-733550(-) m6A CDS//exon       24284625 chr16:733594-733595(-) m6A CDS//exon       24284625//27773536 chr16:733731-733732(-) m6A CDS//exon       24284625//27773536 chr16:733867-733868(-) m6A CDS//exon//intron       24284625//27773536 chr16:733875-733876(-) m6A CDS//exon//intron       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	JMJD8	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H23-5p
Interactor2: JMJD8

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg