Basic Information:

  VIRBase ID:  

VHID00195259

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-5p:  MIMAT0014705          SMTNL1:  NM_001105565     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H23-5p	SMTNL1
miRBase Accession/Entrez ID	MIMAT0014705	219537
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CHASM

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SMTNL1	chr11:57312907(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SMTNL1	chr11:57315892(+) A-I intron -    22327324 chr11:57316653(+) A-I intron -    22327324 chr11:57312339(+) T-C intron -    22484847 chr11:57312375(+) T-C intron -    22484847 chr11:57315892(+) T-C intron -    22484847 chr11:57316031(+) T-C intron -    22484847 chr11:57316060(+) T-C intron -    22484847 chr11:57316061(+) T-C intron -    22484847 chr11:57316502(+) C-T intron -    22484847 chr11:57316591(+) T-C intron -    22484847 chr11:57316653(+) T-C intron -    22484847 chr11:57317099(+) T-C intron -    22484847 chr11:57317137(+) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SMTNL1	chr11:57310393-57310394(+) m6A CDS       27773535 chr11:57310424-57310425(+) m6A CDS       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SMTNL1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H23-5p
Interactor2: SMTNL1

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg