Detail Information

Basic Information:


  VIRBase ID:  

VHID00195102

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-5p:           UBE2J2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H23-5p UBE2J2
miRBase
Accession/Entrez ID		 MIMAT0014705 118424
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - NCUBE-2//NCUBE2//PRO2121

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR UBE2J2
chr1:1200206(-) A-I      NonSyn:Lys->Glu
chr1:1204973(-) A-I      intronic
chr1:1204978(-) A-I      intronic
chr1:1204979(-) A-I      intronic
chr1:1204933(-) A-I      intronic
chr1:1204997(-) A-I      intronic
chr1:1204917(-) A-I      intronic
chr1:1205071(-) A-I      intronic
chr1:1201119(-) A-I      intronic
chr1:1207315(-) A-I      intronic
chr1:1207472(-) A-I      intronic
chr1:1199310(-) A-I      intronic
chr1:1207490(-) A-I      intronic
chr1:1205081(-) A-I      intronic
chr1:1199290(-) A-I      intronic
chr1:1202203(-) A-I      intronic
chr1:1202034(-) A-I      intronic
chr1:1202020(-) A-I      intronic
chr1:1205100(-) A-I      intronic
chr1:1200067(-) A-I      intronic
chr1:1204952(-) A-I      intronic
chr1:1207457(-) A-I      intronic
chr1:1205076(-) A-I      intronic
chr1:1200188(-) A-I      NonSyn:Ser->Gly
chr1:1200122(-) A-I      intronic
chr1:1200124(-) A-I      intronic
chr1:1200205(-) A-I      NonSyn:Lys->Arg
chr1:1207276(-) A-I      intronic
chr1:1199169(-) A-I      intronic
chr1:1201715(-) A-I      intronic
chr1:1202473(-) A-I      intronic
chr1:1200031(-) A-I      intronic
chr1:1202085(-) A-I      intronic
chr1:1207474(-) A-I      intronic
chr1:1201080(-) A-I      intronic
chr1:1201068(-) A-I      intronic
chr1:1202407(-) A-I      intronic
chr1:1199930(-) A-I      intronic
chr1:1207242(-) A-I      intronic
chr1:1204173(-) A-I      intronic
chr1:1201197(-) A-I      intronic
chr1:1199289(-) A-I      intronic
chr1:1200004(-) A-I      intronic
chr1:1193419(-) A-I      intronic
chr1:1205116(-) A-I      intronic
chr1:1201129(-) A-I      intronic
chr1:1200053(-) A-I      intronic
chr1:1207294(-) A-I      intronic
chr1:1202107(-) A-I      intronic
chr1:1204231(-) A-I      intronic
chr1:1201737(-) A-I      intronic
chr1:1204275(-) A-I      intronic
chr1:1201182(-) A-I      intronic
chr1:1207192(-) A-I      intronic
chr1:1200212(-) A-I      intronic
chr1:1202542(-) A-I      intronic
chr1:1201849(-) A-I      intronic
chr1:1200176(-) A-I      NonSyn:Ser->Gly
chr1:1200166(-) A-I      NonSyn:Tyr->Cys
chr1:1201105(-) A-I      intronic
chr1:1205047(-) A-I      intronic
chr1:1202366(-) A-I      intronic
chr1:1199986(-) A-I      intronic
chr1:1204086(-) A-I      intronic
chr1:1200262(-) A-I      intronic
chr1:1201728(-) A-I      intronic
chr1:1204256(-) A-I      intronic
chr1:1202472(-) A-I      intronic
chr1:1202560(-) A-I      intronic
chr1:1201136(-) A-I      intronic
chr1:1201060(-) A-I      intronic
chr1:1199303(-) A-I      intronic
chr1:1201065(-) A-I      intronic
chr1:1199338(-) A-I      intronic
chr1:1202541(-) A-I      intronic
chr1:1201867(-) A-I      intronic
chr1:1200225(-) A-I      intronic
chr1:1201787(-) A-I      intronic
chr1:1207133(-) A-I      intronic
chr1:1205125(-) A-I      intronic
chr1:1201727(-) A-I      intronic
chr1:1202608(-) A-I      intronic
chr1:1201096(-) A-I      intronic
chr1:1207232(-) A-I      intronic
chr1:1201231(-) A-I      intronic
chr1:1201123(-) A-I      intronic
chr1:1201179(-) A-I      intronic
chr1:1199245(-) A-I      intronic
chr1:1205045(-) A-I      intronic
chr1:1202099(-) A-I      intronic
chr1:1202125(-) A-I      intronic
chr1:1201286(-) A-I      intronic
chr1:1207422(-) A-I      intronic
chr1:1201171(-) A-I      intronic
chr1:1202095(-) A-I      intronic
chr1:1204853(-) A-I      intronic
chr1:1201073(-) A-I      intronic
chr1:1205039(-) A-I      intronic
chr1:1207271(-) A-I      intronic
chr1:1200043(-) A-I      intronic
chr1:1202462(-) A-I      intronic
chr1:1204186(-) A-I      intronic
chr1:1201186(-) A-I      intronic
chr1:1207189(-) A-I      intronic
chr1:1207098(-) A-I      intronic
chr1:1202397(-) A-I      intronic
chr1:1202548(-) A-I      intronic
chr1:1201285(-) A-I      intronic
chr1:1199995(-) A-I      intronic
chr1:1202389(-) A-I      intronic
chr1:1207175(-) A-I      intronic
chr1:1201104(-) A-I      intronic
chr1:1204956(-) A-I      intronic
chr1:1202365(-) A-I      intronic
chr1:1199238(-) A-I      intronic
chr1:1205117(-) A-I      intronic
chr1:1201188(-) A-I      intronic
chr1:1201075(-) A-I      intronic
chr1:1204196(-) A-I      intronic
chr1:1205037(-) A-I      intronic
chr1:1207150(-) A-I      intronic
chr1:1200131(-) A-I      intronic
chr1:1201302(-) A-I      intronic
chr1:1204182(-) A-I      intronic
chr1:1201308(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED UBE2J2
chr1:1193419(-) A-G intron -    22484847
chr1:1200004(-) A-G intron -    22484847
chr1:1200031(-) A-G intron -    22484847
chr1:1200043(-) A-G intron -    22484847
chr1:1200053(-) A-G intron -    22484847
chr1:1200166(-) A-G exon CDS    22484847
chr1:1200176(-) A-G exon CDS    22484847
chr1:1200205(-) A-G exon CDS    22484847
chr1:1200212(-) A-G intron -    22484847
chr1:1200264(-) T-C intron -    22484847
chr1:1201065(-) A-G intron -    22484847
chr1:1201073(-) A-G intron -    22484847
chr1:1201096(-) A-G intron -    22484847
chr1:1201104(-) A-G intron -    22484847
chr1:1201105(-) A-G intron -    22484847
chr1:1201123(-) A-G intron -    22484847
chr1:1201136(-) A-G intron -    22484847
chr1:1201171(-) A-G intron -    22484847
chr1:1201179(-) A-G intron -    22484847
chr1:1201182(-) A-G intron -    22484847
chr1:1201186(-) A-G intron -    22484847
chr1:1201188(-) A-G intron -    22484847
chr1:1201197(-) A-G intron -    22484847
chr1:1201737(-) A-G intron -    22484847
chr1:1201787(-) A-G intron -    22484847
chr1:1201849(-) A-G intron -    22484847
chr1:1202085(-) A-G intron -    22484847
chr1:1202095(-) A-G intron -    22484847
chr1:1202099(-) A-G intron -    22484847
chr1:1202107(-) A-G intron -    22484847
chr1:1202407(-) A-G intron -    22484847
chr1:1202462(-) A-G intron -    22484847
chr1:1202473(-) A-G intron -    22484847
chr1:1202520(-) C-G intron -    22484847
chr1:1202542(-) A-G intron -    22484847
chr1:1204182(-) A-G intron -    22484847
chr1:1205037(-) A-G intron -    22484847
chr1:1205116(-) A-G intron -    22484847
chr1:1205117(-) A-G intron -    22484847
chr1:1205125(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase UBE2J2
chr1:1190169-1190170(-) m6A 3'UTR       24284625
chr1:1190253-1190254(-) m6A 3'UTR       24284625//24209618//27773535
chr1:1190296-1190297(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr1:1190310-1190311(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:1190336-1190337(-) Y 3'UTR       26075521
chr1:1190408-1190409(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr1:1190438-1190439(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr1:1190458-1190459(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr1:1190490-1190491(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr1:1190512-1190513(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr1:1190566-1190567(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr1:1190658-1190659(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr1:1190681-1190682(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr1:1190718-1190719(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr1:1190815-1190816(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//27371828//22608085
chr1:1190822-1190823(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//27371828//22608085
chr1:1190834-1190835(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//27371828//22608085
chr1:1190852-1190853(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//22608085
chr1:1190858-1190859(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//22608085
chr1:1191499-1191500(-) m6A 3'UTR//CDS//exon       27773535
chr1:1191596-1191597(-) m6A exon//intron       27773535
chr1:1192392-1192393(-) Y 3'UTR//CDS//exon       26075521
chr1:1203313-1203314(-) m6A 5'UTR//CDS//exon//intron       24209618
chr1:1206916-1206917(-) m6A 5'UTR//intron       24209618//27773536
chr1:1206934-1206935(-) m6A 5'UTR//intron       24209618//27773536
chr1:1208542-1208543(-) m6A 5'UTR//intron       24284625//24209618//24981863//27773536
chr1:1208555-1208556(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27773536
chr1:1208578-1208579(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27773536
chr1:1208600-1208601(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27773536
chr1:1208629-1208630(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27773536
chr1:1208656-1208657(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27773536
chr1:1208668-1208669(-) m6A 5'UTR//intron       24284625//25456834//24981863//27773536
chr1:1208675-1208676(-) m6A 5'UTR//intron       24284625//25456834//24981863//27773536
chr1:1208683-1208684(-) m6A 5'UTR//intron       24284625//25456834//24981863//27773536
chr1:1208794-1208795(-) m6A 5'UTR//intron       24284625//27773536
chr1:1208829-1208830(-) m6A 5'UTR//intron       27773536
chr1:1208884-1208885(-) m6A 5'UTR//exon//intron       27773536
chr1:1208953-1208954(-) m6A 5'UTR//exon//intron       27773536
chr1:1209261-1209262(-) m6A 5'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate UBE2J2
Chromatin K562 cells     -
Cytosol K562 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H23-5p
Interactor2: UBE2J2

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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