Basic Information:

  VIRBase ID:  

VHID00195084

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-5p:  MIMAT0014705          SLC25A25:  NM_001265614     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H23-5p	SLC25A25
miRBase Accession/Entrez ID	MIMAT0014705	114789
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MCSC//PCSCL//SCAMC-2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC25A25	chr9:130836510(+) A-I      intronic chr9:130836512(+) A-I      intronic chr9:130836573(+) A-I      intronic chr9:130836810(+) A-I      intronic chr9:130845419(+) A-I      intronic chr9:130842093(+) A-I      intronic chr9:130845461(+) A-I      intronic chr9:130845853(+) A-I      intronic chr9:130845930(+) A-I      intronic chr9:130846004(+) A-I      intronic chr9:130842094(+) A-I      intronic chr9:130847337(+) A-I      intronic chr9:130847347(+) A-I      intronic chr9:130847448(+) A-I      intronic chr9:130847452(+) A-I      intronic chr9:130847556(+) A-I      intronic chr9:130836817(+) A-I      intronic chr9:130836827(+) A-I      intronic chr9:130836829(+) A-I      intronic chr9:130836832(+) A-I      intronic chr9:130836867(+) A-I      intronic chr9:130836883(+) A-I      intronic chr9:130837201(+) A-I      intronic chr9:130837228(+) A-I      intronic chr9:130847565(+) A-I      intronic chr9:130847567(+) A-I      intronic chr9:130847634(+) A-I      intronic chr9:130842108(+) A-I      intronic chr9:130847657(+) A-I      intronic chr9:130848515(+) A-I      intronic chr9:130848520(+) A-I      intronic chr9:130837229(+) A-I      intronic chr9:130837233(+) A-I      intronic chr9:130837312(+) A-I      intronic chr9:130837366(+) A-I      intronic chr9:130848580(+) A-I      intronic chr9:130848778(+) A-I      intronic chr9:130848821(+) A-I      intronic chr9:130848952(+) A-I      intronic chr9:130849374(+) A-I      intronic chr9:130842308(+) A-I      intronic chr9:130849390(+) A-I      intronic chr9:130849400(+) A-I      intronic chr9:130833084(+) A-I      intronic chr9:130849640(+) A-I      intronic chr9:130842894(+) A-I      intronic chr9:130849670(+) A-I      intronic chr9:130851287(+) A-I      intronic chr9:130851316(+) A-I      intronic chr9:130852548(+) A-I      intronic chr9:130852592(+) A-I      intronic chr9:130852975(+) A-I      intronic chr9:130853012(+) A-I      intronic chr9:130833041(+) A-I      intronic chr9:130833055(+) A-I      intronic chr9:130833804(+) A-I      intronic chr9:130833829(+) A-I      intronic chr9:130845934(+) A-I      intronic chr9:130833053(+) A-I      intronic chr9:130833054(+) A-I      intronic chr9:130842932(+) A-I      intronic chr9:130842938(+) A-I      intronic chr9:130842947(+) A-I      intronic chr9:130833138(+) A-I      intronic chr9:130833109(+) A-I      intronic chr9:130838886(+) A-I      intronic chr9:130841927(+) A-I      intronic chr9:130842951(+) A-I      intronic chr9:130844022(+) A-I      intronic chr9:130844951(+) A-I      intronic chr9:130837371(+) A-I      intronic chr9:130837996(+) A-I      intronic chr9:130838064(+) A-I      intronic chr9:130838073(+) A-I      intronic chr9:130838431(+) A-I      intronic chr9:130845043(+) A-I      intronic chr9:130838610(+) A-I      intronic chr9:130838672(+) A-I      intronic chr9:130838814(+) A-I      intronic chr9:130838822(+) A-I      intronic chr9:130838825(+) A-I      intronic chr9:130838862(+) A-I      intronic chr9:130838884(+) A-I      intronic chr9:130845258(+) A-I      intronic chr9:130833734(+) A-I      intronic chr9:130833913(+) A-I      intronic chr9:130838938(+) A-I      intronic chr9:130839649(+) A-I      intronic chr9:130841782(+) A-I      intronic chr9:130833925(+) A-I      intronic chr9:130841783(+) A-I      intronic chr9:130841859(+) A-I      intronic chr9:130841860(+) A-I      intronic chr9:130842016(+) A-I      intronic chr9:130833956(+) A-I      intronic chr9:130836033(+) A-I      intronic chr9:130836088(+) A-I      intronic chr9:130836265(+) A-I      intronic chr9:130833179(+) A-I      intronic chr9:130845347(+) A-I      intronic chr9:130845356(+) A-I      intronic chr9:130833157(+) A-I      intronic chr9:130845360(+) A-I      intronic chr9:130836273(+) A-I      intronic chr9:130836248(+) A-I      intronic chr9:130845396(+) A-I      intronic chr9:130836474(+) A-I      intronic chr9:130832638(+) A-I      intronic chr9:130832651(+) A-I      intronic chr9:130832657(+) A-I      intronic chr9:130832957(+) A-I      intronic chr9:130832959(+) A-I      intronic chr9:130832992(+) A-I      intronic chr9:130833030(+) A-I      intronic chr9:130842084(+) A-I      intronic chr9:130842092(+) A-I      intronic chr9:130870456(+) A-I      3'UTR chr9:130848521(+) A-I      intronic chr9:130836117(+) A-I      intronic chr9:130844026(+) A-I      intronic chr9:130834091(+) A-I      intronic chr9:130838549(+) A-I      intronic chr9:130849238(+) A-I      intronic chr9:130833965(+) A-I      intronic chr9:130833141(+) A-I      intronic chr9:130837863(+) A-I      intronic chr9:130837935(+) A-I      intronic chr9:130851314(+) A-I      intronic chr9:130837859(+) A-I      intronic chr9:130837684(+) A-I      intronic chr9:130837115(+) A-I      intronic chr9:130836423(+) A-I      intronic chr9:130845171(+) A-I      intronic chr9:130840215(+) A-I      intronic chr9:130844120(+) A-I      intronic chr9:130836444(+) A-I      intronic chr9:130859811(+) A-I      intronic chr9:130845918(+) A-I      intronic chr9:130832095(+) A-I      intronic chr9:130842390(+) A-I      intronic chr9:130852943(+) A-I      intronic chr9:130837466(+) A-I      intronic chr9:130837723(+) A-I      intronic chr9:130836877(+) A-I      intronic chr9:130858665(+) A-I      intronic chr9:130842253(+) A-I      intronic chr9:130845252(+) A-I      intronic chr9:130845928(+) A-I      intronic chr9:130841774(+) A-I      intronic chr9:130839587(+) A-I      intronic chr9:130836083(+) A-I      intronic chr9:130839702(+) A-I      intronic chr9:130846716(+) A-I      intronic chr9:130833150(+) A-I      intronic chr9:130836419(+) A-I      intronic chr9:130845095(+) A-I      intronic chr9:130852031(+) A-I      intronic chr9:130845844(+) A-I      intronic chr9:130867529(+) A-I      intronic chr9:130845869(+) A-I      intronic chr9:130848944(+) A-I      intronic chr9:130849007(+) A-I      intronic chr9:130841858(+) A-I      intronic chr9:130844063(+) A-I      intronic chr9:130846640(+) A-I      intronic chr9:130845024(+) A-I      intronic chr9:130836873(+) A-I      intronic chr9:130839681(+) A-I      intronic chr9:130836884(+) A-I      intronic chr9:130833787(+) A-I      intronic chr9:130845814(+) A-I      intronic chr9:130845025(+) A-I      intronic chr9:130836786(+) A-I      intronic chr9:130840178(+) A-I      intronic chr9:130840226(+) A-I      intronic chr9:130833083(+) A-I      intronic chr9:130849621(+) A-I      intronic chr9:130839641(+) A-I      intronic chr9:130841852(+) A-I      intronic chr9:130845253(+) A-I      intronic chr9:130838480(+) A-I      intronic chr9:130836222(+) A-I      intronic chr9:130847601(+) A-I      intronic chr9:130858696(+) A-I      intronic chr9:130838954(+) A-I      intronic chr9:130836422(+) A-I      intronic chr9:130841828(+) A-I      intronic chr9:130833731(+) A-I      intronic chr9:130838003(+) A-I      intronic chr9:130837934(+) A-I      intronic chr9:130837728(+) A-I      intronic chr9:130838002(+) A-I      intronic chr9:130833110(+) A-I      intronic chr9:130836287(+) A-I      intronic chr9:130845320(+) A-I      intronic chr9:130836828(+) A-I      intronic chr9:130848975(+) A-I      intronic chr9:130834090(+) A-I      intronic chr9:130852517(+) A-I      intronic chr9:130836383(+) A-I      intronic chr9:130839637(+) A-I      intronic chr9:130845092(+) A-I      intronic chr9:130838640(+) A-I      intronic chr9:130840284(+) A-I      intronic chr9:130845050(+) A-I      intronic chr9:130848490(+) A-I      intronic chr9:130832709(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SLC25A25	chr9:130839637(+) A-I intron -    15342557 chr9:130839702(+) A-I intron -    15342557 chr9:130840215(+) A-I intron -    15342557 chr9:130840225(+) A-I intron -    15342557 chr9:130840226(+) A-I intron -    15342557 chr9:130841709(+) A-I intron -    15342557 chr9:130841809(+) A-I intron -    15342557 chr9:130841828(+) A-I intron -    15342557 chr9:130841852(+) A-I intron -    15342557 chr9:130841858(+) A-I intron -    15342557 chr9:130841861(+) A-I intron -    15342557 chr9:130833056(+) A-G intron -    22484847 chr9:130833083(+) A-G intron -    22484847 chr9:130833118(+) A-G intron -    22484847 chr9:130836828(+) A-G intron -    22484847 chr9:130837934(+) A-G intron -    22484847 chr9:130837935(+) A-G intron -    22484847 chr9:130838003(+) A-G intron -    22484847 chr9:130838480(+) A-G intron -    22484847 chr9:130841861(+) A-G intron -    22484847 chr9:130842838(+) A-G intron -    22484847 chr9:130867269(+) G-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC25A25	chr9:130854143-130854144(+) m6A 5'UTR//intron       - chr9:130854264-130854265(+) m6A CDS//intron       - chr9:130854289-130854290(+) m6A CDS//intron       - chr9:130860779-130860780(+) m6A 5'UTR//intron       24981863 chr9:130860797-130860798(+) m6A 5'UTR//intron       24981863 chr9:130860890-130860891(+) m6A CDS//intron       24981863 chr9:130863486-130863487(+) m6A 3'UTR//CDS//exon       27773535 chr9:130863626-130863627(+) m6A 3'UTR//CDS//exon       27773535 chr9:130866036-130866037(+) m6A CDS//exon       24284625 chr9:130866076-130866077(+) m6A CDS//exon       24284625 chr9:130866095-130866096(+) m6A CDS//exon       24284625 chr9:130868458-130868459(+) m6A CDS//intron       24284625 chr9:130869584-130869585(+) m6A 3'UTR//CDS       24284625 chr9:130869597-130869598(+) m6A 3'UTR//CDS       24284625 chr9:130869688-130869689(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22608085 chr9:130869748-130869749(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr9:130869839-130869840(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr9:130869910-130869911(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr9:130869934-130869935(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr9:130869991-130869992(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr9:130869996-130869997(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr9:130870444-130870445(+) m6A 3'UTR       24284625//25456834//22575960 chr9:130870472-130870473(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr9:130870477-130870478(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr9:130870593-130870594(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr9:130870623-130870624(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr9:130870632-130870633(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr9:130870752-130870753(+) m6A 3'UTR       25456834 chr9:130870787-130870788(+) m6A 3'UTR       25456834 chr9:130871005-130871006(+) m6A 3'UTR       24981863//27773535 chr9:130871131-130871132(+) m6A 3'UTR       27371828 chr9:130871274-130871275(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC25A25	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H23-5p
Interactor2: SLC25A25

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg