Basic Information:

  VIRBase ID:  

VHID00195079

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-5p:  MIMAT0014705          FAM83F:  NM_138435     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H23-5p	FAM83F
miRBase Accession/Entrez ID	MIMAT0014705	113828
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FAM83F	chr22:40420145(+) A-I      intronic chr22:40420116(+) A-I      intronic chr22:40420108(+) A-I      intronic chr22:40420104(+) A-I      intronic chr22:40420089(+) A-I      intronic chr22:40422361(+) A-I      intronic chr22:40421160(+) A-I      intronic chr22:40422479(+) A-I      intronic chr22:40422465(+) A-I      intronic chr22:40422403(+) A-I      intronic chr22:40422300(+) A-I      intronic chr22:40422525(+) A-I      intronic chr22:40422469(+) A-I      intronic chr22:40422370(+) A-I      intronic chr22:40422528(+) A-I      intronic chr22:40407372(+) A-I      intronic chr22:40420036(+) A-I      intronic chr22:40420194(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FAM83F	chr22:40394921-40394922(+) m6A exon//intron       25456834 chr22:40394933-40394934(+) m6A exon//intron       25456834 chr22:40394944-40394945(+) m6A exon//intron       25456834 chr22:40394952-40394953(+) m6A exon//intron       25456834 chr22:40394988-40394989(+) m6A exon//intron       25456834 chr22:40417643-40417644(+) m6A CDS       25456834 chr22:40417742-40417743(+) m6A CDS       25456834 chr22:40425768-40425769(+) m6A 3'UTR       25456834//24981863 chr22:40426076-40426077(+) m6A 3'UTR       25456834 chr22:40426101-40426102(+) m6A 3'UTR       25456834 chr22:40426157-40426158(+) m6A 3'UTR       25456834 chr22:40426162-40426163(+) m6A 3'UTR       25456834 chr22:40426716-40426717(+) m6A 3'UTR       25456834 chr22:40426735-40426736(+) m6A 3'UTR       25456834 chr22:40426742-40426743(+) m6A 3'UTR       25456834 chr22:40426810-40426811(+) m6A 3'UTR       25456834 chr22:40426834-40426835(+) m6A 3'UTR       25456834 chr22:40426839-40426840(+) m6A 3'UTR       25456834 chr22:40426869-40426870(+) m6A 3'UTR       25456834 chr22:40426877-40426878(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FAM83F	Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H23-5p
Interactor2: FAM83F

Evidence Support:

Prediction-Evidence	miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg