Basic Information:

  VIRBase ID:  

VHID00195071

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-5p:  MIMAT0014705          PHF21B:  NM_001135862     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H23-5p	PHF21B
miRBase Accession/Entrez ID	MIMAT0014705	112885
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BHC80L//PHF4

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PHF21B	chr22:45300727(-) A-I      intronic chr22:45300723(-) A-I      intronic chr22:45300722(-) A-I      intronic chr22:45300712(-) A-I      intronic chr22:45300708(-) A-I      intronic chr22:45375866(-) A-I      intronic chr22:45375849(-) A-I      intronic chr22:45375825(-) A-I      intronic chr22:45375757(-) A-I      intronic chr22:45374520(-) A-I      intronic chr22:45374512(-) A-I      intronic chr22:45374413(-) A-I      intronic chr22:45374361(-) A-I      intronic chr22:45374307(-) A-I      intronic chr22:45373745(-) A-I      intronic chr22:45373704(-) A-I      intronic chr22:45373694(-) A-I      intronic chr22:45373685(-) A-I      intronic chr22:45373603(-) A-I      intronic chr22:45373597(-) A-I      intronic chr22:45373566(-) A-I      intronic chr22:45373382(-) A-I      intronic chr22:45373363(-) A-I      intronic chr22:45373362(-) A-I      intronic chr22:45373337(-) A-I      intronic chr22:45373336(-) A-I      intronic chr22:45373333(-) A-I      intronic chr22:45373310(-) A-I      intronic chr22:45372948(-) A-I      intronic chr22:45372826(-) A-I      intronic chr22:45371830(-) A-I      intronic chr22:45371827(-) A-I      intronic chr22:45371803(-) A-I      intronic chr22:45365470(-) A-I      intronic chr22:45365424(-) A-I      intronic chr22:45365363(-) A-I      intronic chr22:45364441(-) A-I      intronic chr22:45364437(-) A-I      intronic chr22:45364272(-) A-I      intronic chr22:45357477(-) A-I      intronic chr22:45348026(-) A-I      intronic chr22:45308707(-) A-I      intronic chr22:45384233(-) A-I      intronic chr22:45374463(-) A-I      intronic chr22:45374452(-) A-I      intronic chr22:45374432(-) A-I      intronic chr22:45385614(-) A-I      intronic chr22:45385550(-) A-I      intronic chr22:45384242(-) A-I      intronic chr22:45384226(-) A-I      intronic chr22:45384128(-) A-I      intronic chr22:45379031(-) A-I      intronic chr22:45378913(-) A-I      intronic chr22:45378894(-) A-I      intronic chr22:45375897(-) A-I      intronic chr22:45374378(-) A-I      intronic chr22:45374415(-) A-I      intronic chr22:45374446(-) A-I      intronic chr22:45374455(-) A-I      intronic chr22:45374457(-) A-I      intronic chr22:45384127(-) A-I      intronic chr22:45344299(-) A-I      intronic chr22:45384285(-) A-I      intronic chr22:45364341(-) A-I      intronic chr22:45384298(-) A-I      intronic chr22:45374364(-) A-I      intronic chr22:45371856(-) A-I      intronic chr22:45385622(-) A-I      intronic chr22:45373663(-) A-I      intronic chr22:45357612(-) A-I      intronic chr22:45324357(-) A-I      intronic chr22:45371956(-) A-I      intronic chr22:45364267(-) A-I      intronic chr22:45357599(-) A-I      intronic chr22:45374336(-) A-I      intronic chr22:45375698(-) A-I      intronic chr22:45373556(-) A-I      intronic chr22:45364249(-) A-I      intronic chr22:45372020(-) A-I      intronic chr22:45308610(-) A-I      intronic chr22:45371939(-) A-I      intronic chr22:45372801(-) A-I      intronic chr22:45364448(-) A-I      intronic chr22:45357476(-) A-I      intronic chr22:45374354(-) A-I      intronic chr22:45374380(-) A-I      intronic chr22:45344365(-) A-I      intronic chr22:45374328(-) A-I      intronic chr22:45378906(-) A-I      intronic chr22:45372800(-) A-I      intronic chr22:45317631(-) A-I      intronic chr22:45354800(-) A-I      intronic chr22:45375730(-) A-I      intronic chr22:45374262(-) A-I      intronic chr22:45374476(-) A-I      intronic chr22:45374404(-) A-I      intronic chr22:45375714(-) A-I      intronic chr22:45374408(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PHF21B	chr22:45373663(-) A-I intron -    15342557 chr22:45374255(-) A-I intron -    15342557 chr22:45374262(-) A-I intron -    15342557 chr22:45374312(-) A-I intron -    15342557 chr22:45374328(-) A-I intron -    15342557 chr22:45374336(-) A-I intron -    15342557 chr22:45374351(-) A-I intron -    15342557 chr22:45374354(-) A-I intron -    15342557 chr22:45374404(-) A-I intron -    15342557 chr22:45374407(-) A-I intron -    15342557 chr22:45374408(-) A-I intron -    15342557 chr22:45374476(-) A-I intron -    15342557 chr22:45378906(-) A-I intron -    15342557 chr22:45379621(-) A-I intron -    15342557 chr22:45380110(-) A-I intron -    15342557 chr22:45356936(-) T-C intron -    22484847 chr22:45356954(-) T-C intron -    22484847 chr22:45357097(-) T-C intron -    22484847 chr22:45364249(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PHF21B	chr22:45278203-45278204(-) m6A 3'UTR       25456834//27371828 chr22:45278326-45278327(-) m6A 3'UTR       25456834 chr22:45278607-45278608(-) m6A 3'UTR       27773536 chr22:45278799-45278800(-) m6A 3'UTR       25456834//24981863//27371828 chr22:45278847-45278848(-) m6A 3'UTR       25456834//24981863//27371828 chr22:45278862-45278863(-) m6A 3'UTR       25456834//24981863//27371828 chr22:45278878-45278879(-) m6A 3'UTR       25456834//24981863//27371828 chr22:45278923-45278924(-) m6A 3'UTR       25456834//24981863//27371828 chr22:45278955-45278956(-) m6A 3'UTR       25456834//24981863//27371828 chr22:45279024-45279025(-) m6A CDS       25456834//24981863//27371828 chr22:45279100-45279101(-) m6A CDS       25456834//24981863//27371828 chr22:45279122-45279123(-) m6A CDS       25456834//24981863//27371828//27773536 chr22:45279165-45279166(-) m6A CDS       25456834//24981863//27371828//27773536 chr22:45281330-45281331(-) m6A CDS       25456834//27371828//27773536 chr22:45281745-45281746(-) m6A CDS       27371828 chr22:45281787-45281788(-) m6A CDS       - chr22:45285652-45285653(-) m6A CDS       27371828 chr22:45289341-45289342(-) m6A CDS       27371828 chr22:45289378-45289379(-) m1A CDS       26863410 chr22:45291921-45291922(-) m6A CDS       24981863//27371828//27773536 chr22:45309708-45309709(-) m6A CDS       25456834//24981863//27371828//27773536 chr22:45309729-45309730(-) m6A CDS       25456834//24981863//27371828//27773536 chr22:45312400-45312401(-) m6A 5'UTR//CDS//exon//intron       27371828 chr22:45312457-45312458(-) m6A 5'UTR//CDS//exon//intron       27371828 chr22:45312484-45312485(-) m6A 5'UTR//CDS//exon//intron       27371828//27773536 chr22:45312497-45312498(-) m6A 5'UTR//CDS//exon//intron       27371828//27773536 chr22:45329363-45329364(-) m6A 5'UTR//exon//intron       27371828 chr22:45397121-45397122(-) m6A intron       25456834 chr22:45397143-45397144(-) m6A intron       25456834 chr22:45397154-45397155(-) m6A intron       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PHF21B	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H23-5p
Interactor2: PHF21B

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg