Detail Information

Basic Information:


  VIRBase ID:  

VHID00194981

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-5p:           ABLIM2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H23-5p ABLIM2
miRBase
Accession/Entrez ID		 MIMAT0014705 84448
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ABLIM2
chr4:8058883(-) A-I      intronic
chr4:8061412(-) A-I      intronic
chr4:8058922(-) A-I      intronic
chr4:8058911(-) A-I      intronic
chr4:8058160(-) A-I      intronic
chr4:8019536(-) A-I      intronic
chr4:7995390(-) A-I      intronic
chr4:7992159(-) A-I      intronic
chr4:7988852(-) A-I      intronic
chr4:7982314(-) A-I      intronic
chr4:7984579(-) A-I      intronic
chr4:7982320(-) A-I      intronic
chr4:7975275(-) A-I      intronic
chr4:7975343(-) A-I      intronic
chr4:7982815(-) A-I      intronic
chr4:7982366(-) A-I      intronic
chr4:7982420(-) A-I      intronic
chr4:8058878(-) A-I      intronic
chr4:7975324(-) A-I      intronic
chr4:8058893(-) A-I      intronic
chr4:8058902(-) A-I      intronic
chr4:8059026(-) A-I      intronic
chr4:8059029(-) A-I      intronic
chr4:8059031(-) A-I      intronic
chr4:8059032(-) A-I      intronic
chr4:7978302(-) A-I      intronic
chr4:7978384(-) A-I      intronic
chr4:7982835(-) A-I      intronic
chr4:7975334(-) A-I      intronic
chr4:7975327(-) A-I      intronic
chr4:7978327(-) A-I      intronic
chr4:7978341(-) A-I      intronic
chr4:7978342(-) A-I      intronic
chr4:7978361(-) A-I      intronic
chr4:7982838(-) A-I      intronic
chr4:7978378(-) A-I      intronic
chr4:7976892(-) A-I      intronic
chr4:7982700(-) A-I      intronic
chr4:7982398(-) A-I      intronic
chr4:8022755(-) A-I      intronic
chr4:7975339(-) A-I      intronic
chr4:7976776(-) A-I      intronic
chr4:8059016(-) A-I      intronic
chr4:8058166(-) A-I      intronic
chr4:8017908(-) A-I      intronic
chr4:7976789(-) A-I      intronic
chr4:8075569(-) A-I      intronic
chr4:8018044(-) A-I      intronic
chr4:7976728(-) A-I      intronic
chr4:8058119(-) A-I      intronic
chr4:8059044(-) A-I      intronic
chr4:8019612(-) A-I      intronic
chr4:8058963(-) A-I      intronic
chr4:8019572(-) A-I      intronic
chr4:7982330(-) A-I      intronic
chr4:7984568(-) A-I      intronic
chr4:7995219(-) A-I      intronic
chr4:8019470(-) A-I      intronic
chr4:7992020(-) A-I      intronic
chr4:8019034(-) A-I      intronic
chr4:7982396(-) A-I      intronic
chr4:8114986(-) A-I      intronic
chr4:8061628(-) A-I      intronic
chr4:7995154(-) A-I      intronic
chr4:7995294(-) A-I      intronic
chr4:7982768(-) A-I      intronic
chr4:7988538(-) A-I      intronic
chr4:8114829(-) A-I      intronic
chr4:8005431(-) A-I      intronic
chr4:7982197(-) A-I      intronic
chr4:8058964(-) A-I      intronic
chr4:8076049(-) A-I      intronic
chr4:8019553(-) A-I      intronic
chr4:8076096(-) A-I      intronic
chr4:8019097(-) A-I      intronic
chr4:7982865(-) A-I      intronic
chr4:8019556(-) A-I      intronic
chr4:7982428(-) A-I      intronic
chr4:8058205(-) A-I      intronic
chr4:8019106(-) A-I      intronic
chr4:8057583(-) A-I      intronic
chr4:7976766(-) A-I      intronic
chr4:8019611(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ABLIM2
chr4:7978355(-) T-C intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ABLIM2
chr4:7968448-7968449(-) Cm 3'UTR//exon       -
chr4:8008862-8008863(-) m6A 3'UTR//intron       24284625
chr4:8008869-8008870(-) m6A 3'UTR//intron       24284625
chr4:8008907-8008908(-) m6A 3'UTR//intron       24284625
chr4:8008913-8008914(-) m6A 3'UTR//intron       24284625
chr4:8008961-8008962(-) m6A 3'UTR//intron       24284625
chr4:8008967-8008968(-) m6A 3'UTR//intron       24284625
chr4:8009051-8009052(-) m6A 3'UTR//intron       24284625
chr4:8009508-8009509(-) m6A 3'UTR//exon//intron       25456834
chr4:8009514-8009515(-) m6A 3'UTR//exon//intron       25456834
chr4:8009595-8009596(-) m6A 3'UTR//exon//intron       24284625//25456834
chr4:8009645-8009646(-) m6A 3'UTR//exon//intron       24284625//25456834//22608085
chr4:8009717-8009718(-) m6A 3'UTR//exon//intron       24284625
chr4:8009799-8009800(-) m6A CDS//exon       24284625
chr4:8009823-8009824(-) m6A CDS//exon       24284625
chr4:8009833-8009834(-) m6A CDS//exon       -
chr4:8009862-8009863(-) m6A CDS//exon       -
chr4:8009868-8009869(-) m6A CDS//exon       -
chr4:8009881-8009882(-) m6A CDS//exon       -
chr4:8009889-8009890(-) m6A CDS//exon       -
chr4:8010792-8010793(-) m6A CDS//exon       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ABLIM2
Exosome Blood     -
Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H23-5p
Interactor2: ABLIM2

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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