Basic Information:

  VIRBase ID:  

VHID00194951

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-5p:  MIMAT0014705          RASSF4:  NM_178145     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H23-5p	RASSF4
miRBase Accession/Entrez ID	MIMAT0014705	83937
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AD037

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RASSF4	chr10:45482749(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RASSF4	chr10:45480301-45480302(+) m6A 3'UTR//CDS//exon       - chr10:45488999-45489000(+) m6A 3'UTR//exon       - chr10:45489721-45489722(+) m6A 3'UTR//exon       24209618//24981863//22608085 chr10:45489780-45489781(+) m6A 3'UTR//exon       24209618//24981863//27773535//22608085 chr10:45489824-45489825(+) m6A 3'UTR//exon       24209618//24981863//27773535//22608085 chr10:45489833-45489834(+) m6A 3'UTR//exon       24209618//24981863//27773535//22608085 chr10:45489840-45489841(+) m6A 3'UTR//exon       24209618//24981863//27773535//22608085 chr10:45489891-45489892(+) m6A 3'UTR//exon       24209618//22608085 chr10:45489998-45489999(+) m6A 3'UTR//exon       24209618//25456834//24981863 chr10:45490055-45490056(+) m6A 3'UTR//exon       - chr10:45490237-45490238(+) m6A 3'UTR       24209618 chr10:45490338-45490339(+) m6A 3'UTR       24209618//25456834 chr10:45490372-45490373(+) m6A 3'UTR       24209618//25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RASSF4	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H23-5p
Interactor2: RASSF4

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg