Detail Information

Basic Information:


  VIRBase ID:  

VHID00194815

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-5p:           NADK:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H23-5p NADK
miRBase
Accession/Entrez ID		 MIMAT0014705 65220
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - dJ283E3.1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NADK
chr1:1699420(-) A-I      intronic
chr1:1699785(-) A-I      intronic
chr1:1705260(-) A-I      intronic
chr1:1708465(-) A-I      intronic
chr1:1698629(-) A-I      intronic
chr1:1698461(-) A-I      intronic
chr1:1698459(-) A-I      intronic
chr1:1697190(-) A-I      intronic
chr1:1699925(-) A-I      intronic
chr1:1697462(-) A-I      intronic
chr1:1697450(-) A-I      intronic
chr1:1697267(-) A-I      intronic
chr1:1697266(-) A-I      intronic
chr1:1698451(-) A-I      intronic
chr1:1698302(-) A-I      intronic
chr1:1698273(-) A-I      intronic
chr1:1698265(-) A-I      intronic
chr1:1704752(-) A-I      intronic
chr1:1705848(-) A-I      intronic
chr1:1705846(-) A-I      intronic
chr1:1705834(-) A-I      intronic
chr1:1705808(-) A-I      intronic
chr1:1699446(-) A-I      intronic
chr1:1699440(-) A-I      intronic
chr1:1699432(-) A-I      intronic
chr1:1705373(-) A-I      intronic
chr1:1705338(-) A-I      intronic
chr1:1704423(-) A-I      intronic
chr1:1704361(-) A-I      intronic
chr1:1708046(-) A-I      intronic
chr1:1708405(-) A-I      intronic
chr1:1699199(-) A-I      intronic
chr1:1704275(-) A-I      intronic
chr1:1703968(-) A-I      intronic
chr1:1703967(-) A-I      intronic
chr1:1708395(-) A-I      intronic
chr1:1708166(-) A-I      intronic
chr1:1708417(-) A-I      intronic
chr1:1708435(-) A-I      intronic
chr1:1702411(-) A-I      intronic
chr1:1700871(-) A-I      intronic
chr1:1708168(-) A-I      intronic
chr1:1706534(-) A-I      intronic
chr1:1706496(-) A-I      intronic
chr1:1706465(-) A-I      intronic
chr1:1706301(-) A-I      intronic
chr1:1700823(-) A-I      intronic
chr1:1698606(-) A-I      intronic
chr1:1697434(-) A-I      intronic
chr1:1708449(-) A-I      intronic
chr1:1705966(-) A-I      intronic
chr1:1698486(-) A-I      intronic
chr1:1699395(-) A-I      intronic
chr1:1699867(-) A-I      intronic
chr1:1704380(-) A-I      intronic
chr1:1697181(-) A-I      intronic
chr1:1699228(-) A-I      intronic
chr1:1699208(-) A-I      intronic
chr1:1699811(-) A-I      intronic
chr1:1698468(-) A-I      intronic
chr1:1698456(-) A-I      intronic
chr1:1697537(-) A-I      intronic
chr1:1699355(-) A-I      intronic
chr1:1703999(-) A-I      intronic
chr1:1698518(-) A-I      intronic
chr1:1704274(-) A-I      intronic
chr1:1706426(-) A-I      intronic
chr1:1692365(-) A-I      intronic
chr1:1698450(-) A-I      intronic
chr1:1703898(-) A-I      intronic
chr1:1705328(-) A-I      intronic
chr1:1703447(-) A-I      intronic
chr1:1702291(-) A-I      intronic
chr1:1706365(-) A-I      intronic
chr1:1703766(-) A-I      intronic
chr1:1697233(-) A-I      intronic
chr1:1700852(-) A-I      intronic
chr1:1704613(-) A-I      intronic
chr1:1708454(-) A-I      intronic
chr1:1703994(-) A-I      intronic
chr1:1699180(-) A-I      intronic
chr1:1702365(-) A-I      intronic
chr1:1699429(-) A-I      intronic
chr1:1704998(-) A-I      intronic
chr1:1705790(-) A-I      intronic
chr1:1705285(-) A-I      intronic
chr1:1708473(-) A-I      intronic
chr1:1704441(-) A-I      intronic
chr1:1699850(-) A-I      intronic
chr1:1704310(-) A-I      intronic
chr1:1699987(-) A-I      intronic
chr1:1705814(-) A-I      intronic
chr1:1705798(-) A-I      intronic
chr1:1703709(-) A-I      intronic
chr1:1699759(-) A-I      intronic
chr1:1700858(-) A-I      intronic
chr1:1699886(-) A-I      intronic
chr1:1699361(-) A-I      intronic
chr1:1705420(-) A-I      intronic
chr1:1704945(-) A-I      intronic
chr1:1699794(-) A-I      intronic
chr1:1699720(-) A-I      intronic
chr1:1706379(-) A-I      intronic
chr1:1704647(-) A-I      intronic
chr1:1697305(-) A-I      intronic
chr1:1706382(-) A-I      intronic
chr1:1699161(-) A-I      intronic
chr1:1704703(-) A-I      intronic
chr1:1703538(-) A-I      intronic
chr1:1704417(-) A-I      intronic
chr1:1705851(-) A-I      intronic
chr1:1698208(-) A-I      intronic
chr1:1697208(-) A-I      intronic
chr1:1703740(-) A-I      intronic
chr1:1698383(-) A-I      intronic
chr1:1705229(-) A-I      intronic
chr1:1698324(-) A-I      intronic
chr1:1697227(-) A-I      intronic
chr1:1706290(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED NADK
chr1:1692365(-) A-G intron -    22484847
chr1:1697233(-) A-G intron -    22484847
chr1:1697305(-) A-G intron -    22484847
chr1:1698324(-) A-G intron -    22484847
chr1:1698468(-) A-G intron -    22484847
chr1:1698518(-) A-G intron -    22484847
chr1:1699180(-) A-G intron -    22484847
chr1:1699208(-) A-G intron -    22484847
chr1:1699429(-) A-G intron -    22484847
chr1:1702225(-) G-A intron -    22484847
chr1:1702291(-) A-G intron -    22484847
chr1:1702365(-) A-G intron -    22484847
chr1:1703740(-) A-G intron -    22484847
chr1:1703999(-) A-G intron -    22484847
chr1:1704310(-) A-G intron -    22484847
chr1:1704380(-) A-G intron -    22484847
chr1:1704417(-) A-G intron -    22484847
chr1:1704441(-) A-G intron -    22484847
chr1:1704703(-) A-G intron -    22484847
chr1:1704945(-) A-G intron -    22484847
chr1:1705229(-) A-G intron -    22484847
chr1:1705285(-) A-G intron -    22484847
chr1:1705328(-) A-G intron -    22484847
chr1:1705790(-) A-G intron -    22484847
chr1:1705798(-) A-G intron -    22484847
chr1:1705814(-) A-G intron -    22484847
chr1:1705851(-) A-G intron -    22484847
chr1:1706290(-) A-G intron -    22484847
chr1:1706379(-) A-G intron -    22484847
chr1:1706426(-) A-G intron -    22484847
chr1:1708454(-) A-G intron -    22484847
chr1:1711104(-) T-A intron -    22484847
chr1:1711106(-) A-C intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NADK
chr1:1683245-1683246(-) m6A 3'UTR       24284625
chr1:1683633-1683634(-) m6A 3'UTR       24981863
chr1:1683643-1683644(-) m6A 3'UTR       24981863
chr1:1683746-1683747(-) m6A 3'UTR       24981863
chr1:1684448-1684449(-) m6A 3'UTR//CDS       24284625//27773535//27371828//27773536//22575960
chr1:1685008-1685009(-) m6A 3'UTR//CDS       24284625//27773535//27371828
chr1:1685028-1685029(-) m6A 3'UTR//CDS       24284625//27773535//27371828
chr1:1685062-1685063(-) m6A 3'UTR//CDS       27773535
chr1:1686011-1686012(-) Gm 3'UTR//CDS//exon       -
chr1:1686016-1686017(-) m6A 3'UTR//CDS//exon       27773536
chr1:1686071-1686072(-) m1A 3'UTR//CDS//exon       26863410
chr1:1686143-1686144(-) m6A exon//intron       27773536
chr1:1688006-1688007(-) m6A 3'UTR//CDS//exon       -
chr1:1688042-1688043(-) m6A 3'UTR//CDS//exon       -
chr1:1688107-1688108(-) m6A exon//intron       -
chr1:1688428-1688429(-) m6A exon//intron       25456834
chr1:1688486-1688487(-) m6A exon//intron       25456834//24981863//27371828//22608085
chr1:1688493-1688494(-) m6A exon//intron       25456834//24981863//27371828//22608085
chr1:1688530-1688531(-) m6A exon//intron       25456834//27371828
chr1:1688539-1688540(-) m6A exon//intron       25456834//27371828
chr1:1688710-1688711(-) m6A CDS//exon       27371828//27773536
chr1:1688737-1688738(-) m6A CDS//exon       27371828//27773536
chr1:1693397-1693398(-) m6A CDS//exon       24284625
chr1:1693405-1693406(-) m6A CDS//exon       24284625
chr1:1693428-1693429(-) m6A CDS//exon       24284625
chr1:1693469-1693470(-) m6A CDS//exon       24284625//27773536
chr1:1696754-1696755(-) m6A CDS//exon       24284625//27773536
chr1:1711405-1711406(-) m6A 5'UTR//exon       -
chr1:1711431-1711432(-) m6A 5'UTR//exon       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate NADK
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HeLa-S3 cells|K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H23-5p
Interactor2: NADK

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//Targetscan
Support Database RepTar//VmiReg

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