Basic Information:

  VIRBase ID:  

VHID00194263

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-5p:  MIMAT0014705          AP4S1:  NM_001254727     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H23-5p	AP4S1
miRBase Accession/Entrez ID	MIMAT0014705	11154
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AP47B//CLA20//CLAPS4//CPSQ6//SPG52

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AP4S1	chr14:31543345(+) A-I      intronic chr14:31542879(+) A-I      intronic chr14:31512251(+) A-I      intronic chr14:31512249(+) A-I      intronic chr14:31512226(+) A-I      intronic chr14:31512217(+) A-I      intronic chr14:31543370(+) A-I      intronic chr14:31512231(+) A-I      intronic chr14:31512207(+) A-I      intronic chr14:31543369(+) A-I      intronic chr14:31512225(+) A-I      intronic chr14:31557894(+) A-I      intronic chr14:31546301(+) A-I      intronic chr14:31536296(+) A-I      intronic chr14:31557935(+) A-I      intronic chr14:31557953(+) A-I      intronic chr14:31558255(+) A-I      intronic chr14:31558345(+) A-I      intronic chr14:31558843(+) A-I      intronic chr14:31558857(+) A-I      intronic chr14:31558865(+) A-I      intronic chr14:31558871(+) A-I      intronic chr14:31558927(+) A-I      intronic chr14:31558994(+) A-I      intronic chr14:31559014(+) A-I      intronic chr14:31501907(+) A-I      intronic chr14:31518365(+) A-I      intronic chr14:31520996(+) A-I      intronic chr14:31512262(+) A-I      intronic chr14:31532245(+) A-I      intronic chr14:31522276(+) A-I      intronic chr14:31496717(+) A-I      intronic chr14:31556808(+) A-I      intronic chr14:31496703(+) A-I      intronic chr14:31496697(+) A-I      intronic chr14:31510121(+) A-I      intronic chr14:31558294(+) A-I      intronic chr14:31556238(+) A-I      intronic chr14:31556822(+) A-I      intronic chr14:31559050(+) A-I      intronic chr14:31507084(+) A-I      intronic chr14:31558937(+) A-I      intronic chr14:31525682(+) A-I      intronic chr14:31502439(+) A-I      intronic chr14:31518926(+) A-I      intronic chr14:31501830(+) A-I      intronic chr14:31510126(+) A-I      intronic chr14:31510387(+) A-I      intronic chr14:31510485(+) A-I      intronic chr14:31531398(+) A-I      intronic chr14:31510517(+) A-I      intronic chr14:31543024(+) A-I      intronic chr14:31510539(+) A-I      intronic chr14:31506148(+) A-I      intronic chr14:31559389(+) A-I      intronic chr14:31510103(+) A-I      intronic chr14:31543434(+) A-I      intronic chr14:31542929(+) A-I      intronic chr14:31559274(+) A-I      intronic chr14:31502594(+) A-I      intronic chr14:31556151(+) A-I      intronic chr14:31555807(+) A-I      intronic chr14:31520947(+) A-I      intronic chr14:31539330(+) A-I      intronic chr14:31546302(+) A-I      intronic chr14:31556667(+) A-I      intronic chr14:31518364(+) A-I      intronic chr14:31559324(+) A-I      intronic chr14:31548753(+) A-I      intronic chr14:31522273(+) A-I      intronic chr14:31558892(+) A-I      intronic chr14:31543385(+) A-I      intronic chr14:31558281(+) A-I      intronic chr14:31539516(+) A-I      intronic chr14:31526129(+) A-I      intronic chr14:31501148(+) A-I      intronic chr14:31498873(+) A-I      intronic chr14:31548885(+) A-I      intronic chr14:31512382(+) A-I      intronic chr14:31499688(+) A-I      intronic chr14:31515272(+) A-I      intronic chr14:31539301(+) A-I      intronic chr14:31515861(+) A-I      intronic chr14:31515889(+) A-I      intronic chr14:31515905(+) A-I      intronic chr14:31517380(+) A-I      intronic chr14:31517400(+) A-I      intronic chr14:31517495(+) A-I      intronic chr14:31517530(+) A-I      intronic chr14:31517531(+) A-I      intronic chr14:31517771(+) A-I      intronic chr14:31517795(+) A-I      intronic chr14:31517824(+) A-I      intronic chr14:31502581(+) A-I      intronic chr14:31533977(+) A-I      intronic chr14:31517825(+) A-I      intronic chr14:31518463(+) A-I      intronic chr14:31520270(+) A-I      intronic chr14:31521047(+) A-I      intronic chr14:31521077(+) A-I      intronic chr14:31521087(+) A-I      intronic chr14:31521243(+) A-I      intronic chr14:31521275(+) A-I      intronic chr14:31521318(+) A-I      intronic chr14:31521321(+) A-I      intronic chr14:31521324(+) A-I      intronic chr14:31521380(+) A-I      intronic chr14:31521392(+) A-I      intronic chr14:31522227(+) A-I      intronic chr14:31522264(+) A-I      intronic chr14:31523562(+) A-I      intronic chr14:31523563(+) A-I      intronic chr14:31502586(+) A-I      intronic chr14:31506185(+) A-I      intronic chr14:31501774(+) A-I      intronic chr14:31533667(+) A-I      intronic chr14:31506194(+) A-I      intronic chr14:31506203(+) A-I      intronic chr14:31501182(+) A-I      intronic chr14:31499790(+) A-I      intronic chr14:31506220(+) A-I      intronic chr14:31552938(+) A-I      intronic chr14:31506884(+) A-I      intronic chr14:31525620(+) A-I      intronic chr14:31506901(+) A-I      intronic chr14:31556134(+) A-I      intronic chr14:31506923(+) A-I      intronic chr14:31507053(+) A-I      intronic chr14:31499789(+) A-I      intronic chr14:31499661(+) A-I      intronic chr14:31499403(+) A-I      intronic chr14:31510101(+) A-I      intronic chr14:31510114(+) A-I      intronic chr14:31499287(+) A-I      intronic chr14:31510120(+) A-I      intronic chr14:31499286(+) A-I      intronic chr14:31498986(+) A-I      intronic chr14:31498948(+) A-I      intronic chr14:31498943(+) A-I      intronic chr14:31498938(+) A-I      intronic chr14:31498912(+) A-I      intronic chr14:31498847(+) A-I      intronic chr14:31525629(+) A-I      intronic chr14:31498043(+) A-I      intronic chr14:31525704(+) A-I      intronic chr14:31497961(+) A-I      intronic chr14:31525706(+) A-I      intronic chr14:31513734(+) A-I      intronic chr14:31525748(+) A-I      intronic chr14:31525799(+) A-I      intronic chr14:31526081(+) A-I      intronic chr14:31531919(+) A-I      intronic chr14:31531927(+) A-I      intronic chr14:31497651(+) A-I      intronic chr14:31497618(+) A-I      intronic chr14:31497550(+) A-I      intronic chr14:31532679(+) A-I      intronic chr14:31521114(+) A-I      intronic chr14:31532733(+) A-I      intronic chr14:31532783(+) A-I      intronic chr14:31533597(+) A-I      intronic chr14:31533631(+) A-I      intronic chr14:31533645(+) A-I      intronic chr14:31533790(+) A-I      intronic chr14:31534041(+) A-I      intronic chr14:31534092(+) A-I      intronic chr14:31536209(+) A-I      intronic chr14:31536359(+) A-I      intronic chr14:31536364(+) A-I      intronic chr14:31536397(+) A-I      intronic chr14:31536842(+) A-I      intronic chr14:31537296(+) A-I      intronic chr14:31539673(+) A-I      intronic chr14:31540056(+) A-I      intronic chr14:31540061(+) A-I      intronic chr14:31540071(+) A-I      intronic chr14:31540183(+) A-I      intronic chr14:31541408(+) A-I      intronic chr14:31542598(+) A-I      intronic chr14:31542832(+) A-I      intronic chr14:31542908(+) A-I      intronic chr14:31542926(+) A-I      intronic chr14:31542946(+) A-I      intronic chr14:31543355(+) A-I      intronic chr14:31543366(+) A-I      intronic chr14:31543371(+) A-I      intronic chr14:31545023(+) A-I      intronic chr14:31546310(+) A-I      intronic chr14:31547122(+) A-I      intronic chr14:31547139(+) A-I      intronic chr14:31558944(+) A-I      intronic chr14:31548757(+) A-I      intronic chr14:31548821(+) A-I      intronic chr14:31552955(+) A-I      intronic chr14:31557852(+) A-I      intronic chr14:31555720(+) A-I      intronic chr14:31555822(+) A-I      intronic chr14:31556164(+) A-I      intronic chr14:31556355(+) A-I      intronic chr14:31557785(+) A-I      intronic chr14:31557794(+) A-I      intronic chr14:31557807(+) A-I      intronic chr14:31557830(+) A-I      intronic chr14:31557867(+) A-I      intronic chr14:31554725(+) A-I      3'UTR chr14:31554831(+) A-I      3'UTR chr14:31554835(+) A-I      3'UTR chr14:31554868(+) A-I      3'UTR chr14:31554721(+) A-I      3'UTR chr14:31554730(+) A-I      3'UTR chr14:31554864(+) A-I      3'UTR chr14:31554748(+) A-I      3'UTR chr14:31554960(+) A-I      3'UTR chr14:31554747(+) A-I      3'UTR chr14:31554798(+) A-I      3'UTR chr14:31554716(+) A-I      3'UTR chr14:31554871(+) A-I      3'UTR chr14:31554751(+) A-I      3'UTR chr14:31554881(+) A-I      3'UTR chr14:31554740(+) A-I      3'UTR chr14:31499281(+) A-I      intronic chr14:31541192(+) A-I      intronic chr14:31556662(+) A-I      intronic chr14:31515783(+) A-I      intronic chr14:31536355(+) A-I      intronic chr14:31521319(+) A-I      intronic chr14:31498908(+) A-I      intronic chr14:31557856(+) A-I      intronic chr14:31555759(+) A-I      intronic chr14:31517441(+) A-I      intronic chr14:31543335(+) A-I      intronic chr14:31498051(+) A-I      intronic chr14:31551108(+) A-I      intronic chr14:31534038(+) A-I      intronic chr14:31543867(+) A-I      intronic chr14:31558331(+) A-I      intronic chr14:31506914(+) A-I      intronic chr14:31555700(+) A-I      intronic chr14:31558186(+) A-I      intronic chr14:31531505(+) A-I      intronic chr14:31513789(+) A-I      intronic chr14:31515895(+) A-I      intronic chr14:31559381(+) A-I      intronic chr14:31532685(+) A-I      intronic chr14:31517703(+) A-I      intronic chr14:31521315(+) A-I      intronic chr14:31520971(+) A-I      intronic chr14:31548974(+) A-I      intronic chr14:31555884(+) A-I      intronic chr14:31517679(+) A-I      intronic chr14:31536319(+) A-I      intronic chr14:31556168(+) A-I      intronic chr14:31555749(+) A-I      intronic chr14:31559394(+) A-I      intronic chr14:31555802(+) A-I      intronic chr14:31552856(+) A-I      intronic chr14:31556643(+) A-I      intronic chr14:31556169(+) A-I      intronic chr14:31551103(+) A-I      intronic chr14:31517884(+) A-I      intronic chr14:31502585(+) A-I      intronic chr14:31550105(+) A-I      intronic chr14:31497923(+) A-I      intronic chr14:31536987(+) A-I      intronic chr14:31510513(+) A-I      intronic chr14:31533962(+) A-I      intronic chr14:31557804(+) A-I      intronic chr14:31558234(+) A-I      intronic chr14:31526104(+) A-I      intronic chr14:31552898(+) A-I      intronic chr14:31521050(+) A-I      intronic chr14:31559334(+) A-I      intronic chr14:31558946(+) A-I      intronic chr14:31558239(+) A-I      intronic chr14:31559018(+) A-I      intronic chr14:31499018(+) A-I      intronic chr14:31559430(+) A-I      intronic chr14:31498808(+) A-I      intronic chr14:31559275(+) A-I      intronic chr14:31558167(+) A-I      intronic chr14:31518916(+) A-I      intronic chr14:31523860(+) A-I      intronic chr14:31501138(+) A-I      intronic chr14:31550052(+) A-I      intronic chr14:31512362(+) A-I      intronic chr14:31558316(+) A-I      intronic chr14:31550178(+) A-I      intronic chr14:31521276(+) A-I      intronic chr14:31546218(+) A-I      intronic chr14:31502520(+) A-I      intronic chr14:31555694(+) A-I      intronic chr14:31507010(+) A-I      intronic chr14:31537152(+) A-I      intronic chr14:31497626(+) A-I      intronic chr14:31557758(+) A-I      intronic chr14:31499682(+) A-I      intronic chr14:31558866(+) A-I      intronic chr14:31537308(+) A-I      intronic chr14:31551155(+) A-I      intronic chr14:31558091(+) A-I      intronic chr14:31499218(+) A-I      intronic chr14:31537192(+) A-I      intronic chr14:31559226(+) A-I      intronic chr14:31537214(+) A-I      intronic chr14:31532052(+) A-I      intronic chr14:31515888(+) A-I      intronic chr14:31497894(+) A-I      intronic chr14:31550272(+) A-I      intronic chr14:31541181(+) A-I      intronic chr14:31525669(+) A-I      intronic chr14:31527913(+) A-I      intronic chr14:31551165(+) A-I      intronic chr14:31558967(+) A-I      intronic chr14:31552937(+) A-I      intronic chr14:31525634(+) A-I      intronic chr14:31506158(+) A-I      intronic chr14:31518356(+) A-I      intronic chr14:31512269(+) A-I      intronic chr14:31546313(+) A-I      intronic chr14:31537240(+) A-I      intronic chr14:31497598(+) A-I      intronic chr14:31501746(+) A-I      intronic chr14:31510375(+) A-I      intronic chr14:31559107(+) A-I      intronic chr14:31523845(+) A-I      intronic chr14:31521219(+) A-I      intronic chr14:31555844(+) A-I      intronic chr14:31556343(+) A-I      intronic chr14:31559046(+) A-I      intronic chr14:31559075(+) A-I      intronic chr14:31542812(+) A-I      intronic chr14:31552936(+) A-I      intronic chr14:31543427(+) A-I      intronic chr14:31558947(+) A-I      intronic chr14:31551086(+) A-I      intronic chr14:31526243(+) A-I      intronic chr14:31510102(+) A-I      intronic chr14:31499226(+) A-I      intronic chr14:31558286(+) A-I      intronic chr14:31518924(+) A-I      intronic chr14:31536374(+) A-I      intronic chr14:31498809(+) A-I      intronic chr14:31542442(+) A-I      intronic chr14:31525615(+) A-I      intronic chr14:31543767(+) A-I      intronic chr14:31521317(+) A-I      intronic chr14:31497540(+) A-I      intronic chr14:31559045(+) A-I      intronic chr14:31521248(+) A-I      intronic chr14:31520970(+) A-I      intronic chr14:31559372(+) A-I      intronic chr14:31498845(+) A-I      intronic chr14:31556823(+) A-I      intronic chr14:31540898(+) A-I      intronic chr14:31517488(+) A-I      intronic chr14:31547144(+) A-I      intronic chr14:31551177(+) A-I      intronic chr14:31559004(+) A-I      intronic chr14:31513647(+) A-I      intronic chr14:31550044(+) A-I      intronic chr14:31521312(+) A-I      intronic chr14:31534040(+) A-I      intronic chr14:31497960(+) A-I      intronic chr14:31514234(+) A-I      intronic chr14:31558882(+) A-I      intronic chr14:31498818(+) A-I      intronic chr14:31557853(+) A-I      intronic chr14:31527843(+) A-I      intronic chr14:31559466(+) A-I      intronic chr14:31555724(+) A-I      intronic chr14:31501156(+) A-I      intronic chr14:31543749(+) A-I      intronic chr14:31533979(+) A-I      intronic chr14:31541845(+) A-I      intronic chr14:31558221(+) A-I      intronic chr14:31512266(+) A-I      intronic chr14:31547083(+) A-I      intronic chr14:31531434(+) A-I      intronic chr14:31531896(+) A-I      intronic chr14:31514225(+) A-I      intronic chr14:31497524(+) A-I      intronic chr14:31546265(+) A-I      intronic chr14:31525645(+) A-I      intronic chr14:31559064(+) A-I      intronic chr14:31497545(+) A-I      intronic chr14:31502661(+) A-I      intronic chr14:31517369(+) A-I      intronic chr14:31523839(+) A-I      intronic chr14:31555805(+) A-I      intronic chr14:31537068(+) A-I      intronic chr14:31554924(+) A-I      3'UTR chr14:31554858(+) A-I      3'UTR chr14:31554865(+) A-I      3'UTR chr14:31554794(+) A-I      3'UTR chr14:31554875(+) A-I      3'UTR chr14:31554899(+) A-I      3'UTR chr14:31554669(+) A-I      3'UTR chr14:31554894(+) A-I      3'UTR chr14:31554770(+) A-I      3'UTR chr14:31554856(+) A-I      3'UTR chr14:31554724(+) A-I      3'UTR chr14:31554779(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	AP4S1	chr14:31552735(+) A-I intron -    15258596 chr14:31552788(+) A-I intron -    15258596 chr14:31552828(+) A-I intron -    15258596 chr14:31554669(+) A-I exon 3'UTR    15258596 chr14:31554770(+) A-I exon 3'UTR    15258596 chr14:31554798(+) A-I exon 3'UTR    15258596 chr14:31554865(+) A-I exon 3'UTR    15258596 chr14:31565144(+) A-I intron -    22327324 chr14:31565152(+) A-I intron -    22327324 chr14:31562737(+) A-I intron -    21960545 chr14:31562756(+) A-I intron -    21960545 chr14:31562792(+) A-I intron -    21960545 chr14:31562802(+) A-I intron -    21960545 chr14:31563118(+) A-I intron -    21960545 chr14:31563119(+) A-I intron -    21960545 chr14:31563122(+) A-I intron -    21960545 chr14:31563123(+) A-I intron -    21960545 chr14:31506914(+) A-G intron -    22484847 chr14:31551108(+) A-G intron -    22484847 chr14:31554779(+) A-G intron -    22484847 chr14:31554881(+) A-G intron -    22484847 chr14:31554899(+) A-G intron -    22484847 chr14:31555759(+) A-G intron -    22484847 chr14:31557804(+) A-G intron -    22484847 chr14:31558091(+) A-G intron -    22484847 chr14:31558937(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AP4S1	chr14:31494945-31494946(+) m6A 5'UTR//intron       24284625//25456834//24981863 chr14:31494969-31494970(+) m6A 5'UTR//intron       24284625//25456834//24981863 chr14:31495862-31495863(+) m6A 5'UTR//intron       24284625//25456834//24981863 chr14:31496146-31496147(+) m6A 5'UTR//intron       27773535 chr14:31562258-31562259(+) m6A 3'UTR       24981863//27773535//22608085 chr14:31562331-31562332(+) m6A 3'UTR       24981863//27773535//22608085 chr14:31562364-31562365(+) m6A 3'UTR       24981863//27773535//22608085 chr14:31562404-31562405(+) m6A 3'UTR       24981863//27773535//22608085 chr14:31562450-31562451(+) m6A 3'UTR       24981863//27773535 chr14:31562482-31562483(+) m6A 3'UTR       24981863//27773535 chr14:31562523-31562524(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AP4S1	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H23-5p
Interactor2: AP4S1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg