Basic Information:

  VIRBase ID:  

VHID00193831

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-5p:  MIMAT0014705          PEX10:  NR_164636     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H23-5p	PEX10
miRBase Accession/Entrez ID	MIMAT0014705	5192
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	NALD//PBD6A//PBD6B//RNF69

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PEX10	chr1:2336772(-) A-I      3'UTR chr1:2336604(-) A-I      3'UTR chr1:2336624(-) A-I      3'UTR chr1:2336628(-) A-I      3'UTR chr1:2336632(-) A-I      3'UTR chr1:2336729(-) A-I      3'UTR chr1:2336734(-) A-I      3'UTR chr1:2336750(-) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PEX10	chr1:2336272-2336273(-) m6A 3'UTR       24981863//27773535 chr1:2336320-2336321(-) m6A 3'UTR       24981863//27773535 chr1:2336548-2336549(-) m6A 3'UTR       24284625//27773535 chr1:2336631-2336632(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//27773536 chr1:2336659-2336660(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//27371828//27773536//22575960 chr1:2336733-2336734(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr1:2336803-2336804(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr1:2336835-2336836(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22575960//22608085 chr1:2336863-2336864(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085 chr1:2336902-2336903(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085 chr1:2336968-2336969(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085 chr1:2336995-2336996(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085 chr1:2337002-2337003(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085 chr1:2337053-2337054(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085 chr1:2337106-2337107(-) m6A 3'UTR       24284625//24981863//27773535 chr1:2337181-2337182(-) m6A 3'UTR       27773535 chr1:2340170-2340171(-) m6A 3'UTR//5'UTR//CDS//exon       27773536 chr1:2340251-2340252(-) m6A 3'UTR//5'UTR//CDS//exon       27773536 chr1:2340288-2340289(-) m6A 3'UTR//5'UTR//CDS//exon       27773536 chr1:2341156-2341157(-) m6A exon//intron       27773536 chr1:2341194-2341195(-) m6A exon//intron       27773536 chr1:2341223-2341224(-) m6A exon//intron       27773536 chr1:2342089-2342090(-) m6A 3'UTR//intron       27773536 chr1:2342148-2342149(-) m6A 3'UTR//intron       27773536 chr1:2342182-2342183(-) m6A 3'UTR//intron       27773536 chr1:2343950-2343951(-) m6A 5'UTR//intron       24981863//27773536 chr1:2343959-2343960(-) m6A 5'UTR//intron       24981863//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PEX10	Cytosol K562 cells     - Exosome Blood     - Membrane K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H23-5p
Interactor2: PEX10

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg