Detail Information

Basic Information:


  VIRBase ID:  

VHID00193524

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-5p:           AZU1:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H23-5p AZU1
miRBase
Accession/Entrez ID
MIMAT0014705 566
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - AZAMP//AZU//CAP37//HBP//hHBP//HUMAZUR//NAZC

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR AZU1
chr19:826666(+) A-I      intronic
chr19:826679(+) A-I      intronic
chr19:830523(+) A-I      intronic
chr19:830554(+) A-I      intronic
chr19:825947(+) A-I      intronic
chr19:826715(+) A-I      intronic
chr19:827263(+) A-I      intronic
chr19:826040(+) A-I      intronic
chr19:825499(+) A-I      intronic
chr19:826771(+) A-I      intronic
chr19:826650(+) A-I      intronic
chr19:825951(+) A-I      intronic
chr19:827025(+) A-I      intronic
chr19:826249(+) A-I      intronic
chr19:827304(+) A-I      intronic
chr19:830006(+) A-I      intronic
chr19:825955(+) A-I      intronic
chr19:826015(+) A-I      intronic
chr19:826122(+) A-I      intronic
chr19:827127(+) A-I      intronic
chr19:827133(+) A-I      intronic
chr19:827299(+) A-I      intronic
chr19:826157(+) A-I      intronic
chr19:825868(+) A-I      intronic
chr19:827296(+) A-I      intronic
chr19:825865(+) A-I      intronic
chr19:827019(+) A-I      intronic
chr19:825908(+) A-I      intronic
chr19:826148(+) A-I      intronic
chr19:830519(+) A-I      intronic
chr19:826934(+) A-I      intronic
chr19:827119(+) A-I      intronic
chr19:829936(+) A-I      intronic
chr19:826206(+) A-I      intronic
chr19:825579(+) A-I      intronic
chr19:825524(+) A-I      intronic
chr19:827374(+) A-I      intronic
chr19:826229(+) A-I      intronic
chr19:827222(+) A-I      intronic
chr19:826193(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase AZU1
chr19:825153-825154(+) m6A 5'UTR       -
chr19:825193-825194(+) m6A 5'UTR       -
chr19:828247-828248(+) m6A 5'UTR//CDS       -
chr19:829563-829564(+) m6A CDS       -
chr19:829680-829681(+) m6A CDS       -
chr19:830711-830712(+) m6A CDS       -
chr19:830879-830880(+) m6A CDS       -
chr19:831072-831073(+) m6A 3'UTR//intron       -
chr19:831098-831099(+) m6A 3'UTR//intron       -
chr19:831382-831383(+) m6A 3'UTR//intron       -
chr19:831434-831435(+) m6A 3'UTR//intron       -
chr19:831468-831469(+) m6A 3'UTR//intron       -
chr19:831618-831619(+) m6A 3'UTR//intron       -
chr19:831830-831831(+) m6A 3'UTR//CDS       -
chr19:831861-831862(+) m6A 3'UTR//CDS       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate AZU1
Cytosol K562 cells     -
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H23-5p
Interactor2: AZU1

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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