Basic Information:

  VIRBase ID:  

VHID00193508

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H23-5p:  MIMAT0014705          NUDT2:  NM_001161     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H23-5p	NUDT2
miRBase Accession/Entrez ID	MIMAT0014705	318
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	APAH1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NUDT2	chr9:34339688(+) A-I      intronic chr9:34342766(+) A-I      intronic chr9:34339634(+) A-I      intronic chr9:34341552(+) A-I      intronic chr9:34339680(+) A-I      intronic chr9:34339657(+) A-I      intronic chr9:34339683(+) A-I      intronic chr9:34338447(+) A-I      intronic chr9:34339689(+) A-I      intronic chr9:34339694(+) A-I      intronic chr9:34340958(+) A-I      intronic chr9:34340865(+) A-I      intronic chr9:34340186(+) A-I      intronic chr9:34338402(+) A-I      intronic chr9:34338461(+) A-I      intronic chr9:34338451(+) A-I      intronic chr9:34341705(+) A-I      intronic chr9:34336614(+) A-I      intronic chr9:34337891(+) A-I      intronic chr9:34337913(+) A-I      intronic chr9:34337959(+) A-I      intronic chr9:34340156(+) A-I      intronic chr9:34340099(+) A-I      intronic chr9:34339698(+) A-I      intronic chr9:34340088(+) A-I      intronic chr9:34338007(+) A-I      intronic chr9:34338042(+) A-I      intronic chr9:34339608(+) A-I      intronic chr9:34338217(+) A-I      intronic chr9:34339679(+) A-I      intronic chr9:34340085(+) A-I      intronic chr9:34340072(+) A-I      intronic chr9:34340033(+) A-I      intronic chr9:34339775(+) A-I      intronic chr9:34339767(+) A-I      intronic chr9:34339734(+) A-I      intronic chr9:34339681(+) A-I      intronic chr9:34333356(+) A-I      intronic chr9:34339676(+) A-I      intronic chr9:34339663(+) A-I      intronic chr9:34342753(+) A-I      intronic chr9:34340226(+) A-I      intronic chr9:34337856(+) A-I      intronic chr9:34340002(+) A-I      intronic chr9:34333443(+) A-I      intronic chr9:34337886(+) A-I      intronic chr9:34340885(+) A-I      intronic chr9:34340878(+) A-I      intronic chr9:34339656(+) A-I      intronic chr9:34339791(+) A-I      intronic chr9:34339563(+) A-I      intronic chr9:34340195(+) A-I      intronic chr9:34336643(+) A-I      intronic chr9:34341708(+) A-I      intronic chr9:34338488(+) A-I      intronic chr9:34336564(+) A-I      intronic chr9:34336625(+) A-I      intronic chr9:34339678(+) A-I      intronic chr9:34338284(+) A-I      intronic chr9:34339720(+) A-I      intronic chr9:34340898(+) A-I      intronic chr9:34342925(+) A-I      intronic chr9:34338242(+) A-I      intronic chr9:34339583(+) A-I      intronic chr9:34339952(+) A-I      intronic chr9:34340154(+) A-I      intronic chr9:34339631(+) A-I      intronic chr9:34338137(+) A-I      intronic chr9:34336732(+) A-I      intronic chr9:34340873(+) A-I      intronic chr9:34336626(+) A-I      intronic chr9:34338385(+) A-I      intronic chr9:34330324(+) A-I      intronic chr9:34338128(+) A-I      intronic chr9:34339662(+) A-I      intronic chr9:34339776(+) A-I      intronic chr9:34339685(+) A-I      intronic chr9:34338362(+) A-I      intronic chr9:34338426(+) A-I      intronic chr9:34339755(+) A-I      intronic chr9:34339591(+) A-I      intronic chr9:34340859(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NUDT2	chr9:34338128(+) A-G intron -    22484847 chr9:34338137(+) A-G intron -    22484847 chr9:34339803(+) A-G intron -    22484847 chr9:34340885(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NUDT2	chr9:34336268-34336269(+) m6A 5'UTR//intron       24981863 chr9:34338746-34338747(+) m6A 5'UTR//intron       24981863 chr9:34339034-34339035(+) m6A 5'UTR       - chr9:34339151-34339152(+) m6A CDS       24981863 chr9:34343131-34343132(+) m6A CDS       24284625//24209618//24981863//22608085 chr9:34343153-34343154(+) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr9:34343168-34343169(+) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr9:34343230-34343231(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22608085 chr9:34343250-34343251(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22608085 chr9:34343261-34343262(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22608085 chr9:34343292-34343293(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22608085 chr9:34343407-34343408(+) m6A CDS       24284625//24209618//25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NUDT2	Chromatin K562 cells     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H23-5p
Interactor2: NUDT2

Evidence Support:

Prediction-Evidence	cRep//RNAHybrid
Support Database	RepTar//VmiReg