Basic Information:

  VIRBase ID:  

VHID00192479

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H22:  MIMAT0014704          ARHGEF19:  NM_153213     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H22	ARHGEF19
miRBase Accession/Entrez ID	MIMAT0014704	128272
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	WGEF

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ARHGEF19	chr1:16530634(-) A-I      intronic chr1:16527711(-) A-I      intronic chr1:16527649(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ARHGEF19	chr1:16527649(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ARHGEF19	chr1:16524712-16524713(-) m6A 3'UTR//exon       24284625//25456834 chr1:16524750-16524751(-) m6A 3'UTR//exon       24284625//25456834//24981863 chr1:16524811-16524812(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr1:16524844-16524845(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr1:16524942-16524943(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr1:16525061-16525062(-) m6A 3'UTR//exon       24284625//24209618//25456834 chr1:16525102-16525103(-) m6A CDS//exon       24209618 chr1:16525142-16525143(-) m6A CDS//exon       24209618 chr1:16525653-16525654(-) m6A CDS//exon       24209618 chr1:16525659-16525660(-) m6A CDS//exon       24209618 chr1:16525680-16525681(-) m6A CDS//exon       24209618 chr1:16525722-16525723(-) m6A CDS//exon       - chr1:16528302-16528303(-) m6A CDS//exon       24284625 chr1:16532506-16532507(-) m6A CDS//exon       - chr1:16532566-16532567(-) m6A CDS//exon       24284625 chr1:16532875-16532876(-) m6A CDS//exon//intron       24981863 chr1:16533024-16533025(-) m6A CDS//intron       24981863 chr1:16535544-16535545(-) m6A CDS       25456834 chr1:16539031-16539032(-) m6A 5'UTR       25456834 chr1:16539076-16539077(-) m6A 5'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ARHGEF19	Chromatin K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H22
Interactor2: ARHGEF19

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg