Basic Information:

  VIRBase ID:  

VHID00192473

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H22:  MIMAT0014704          GOLT1A:  NM_198447     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H22	GOLT1A
miRBase Accession/Entrez ID	MIMAT0014704	127845
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CGI-141//GOT1//hGOT1b//HMFN1187//YMR292W

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	GOLT1A	chr1:204179689(-) A-I      intronic chr1:204177447(-) A-I      intronic chr1:204177449(-) A-I      intronic chr1:204177453(-) A-I      intronic chr1:204177455(-) A-I      intronic chr1:204177463(-) A-I      intronic chr1:204177471(-) A-I      intronic chr1:204177461(-) A-I      intronic chr1:204179593(-) A-I      intronic chr1:204179698(-) A-I      intronic chr1:204179800(-) A-I      intronic chr1:204179659(-) A-I      intronic chr1:204181643(-) A-I      intronic chr1:204173952(-) A-I      intronic chr1:204179787(-) A-I      intronic chr1:204169550(-) A-I      intronic chr1:204174087(-) A-I      intronic chr1:204173927(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	GOLT1A	chr1:204173846(-) A-I intron -    21960545

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GOLT1A	chr1:204167371-204167372(-) m6A 3'UTR       25456834//24981863//27773535 chr1:204167382-204167383(-) m6A 3'UTR       25456834//24981863//27773535 chr1:204167475-204167476(-) m6A 3'UTR       24209618//25456834//24981863//27773535 chr1:204167522-204167523(-) m6A 3'UTR       24209618//25456834//24981863//27773535 chr1:204167562-204167563(-) m6A 3'UTR       25456834//24981863//27773535 chr1:204167581-204167582(-) m6A 3'UTR       25456834//24981863//27773535 chr1:204167612-204167613(-) m6A CDS       25456834//24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GOLT1A	Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H22
Interactor2: GOLT1A

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg