Basic Information:

  VIRBase ID:  

VHID00192435

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H22:  MIMAT0014704          TMIGD2:  NM_001169126     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H22	TMIGD2
miRBase Accession/Entrez ID	MIMAT0014704	126259
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CD28H//IGPR-1//IGPR1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TMIGD2	chr19:4299234(-) A-I      intronic chr19:4299239(-) A-I      intronic chr19:4299253(-) A-I      intronic chr19:4299342(-) A-I      intronic chr19:4300632(-) A-I      intronic chr19:4301007(-) A-I      intronic chr19:4301098(-) A-I      intronic chr19:4301117(-) A-I      intronic chr19:4301121(-) A-I      intronic chr19:4299280(-) A-I      intronic chr19:4299250(-) A-I      intronic chr19:4299338(-) A-I      intronic chr19:4301045(-) A-I      intronic chr19:4301662(-) A-I      intronic chr19:4297477(-) A-I      intronic chr19:4299636(-) A-I      intronic chr19:4300297(-) A-I      intronic chr19:4297521(-) A-I      intronic chr19:4299852(-) A-I      intronic chr19:4296008(-) A-I      intronic chr19:4300620(-) A-I      intronic chr19:4301665(-) A-I      intronic chr19:4298676(-) A-I      intronic chr19:4299966(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMIGD2	chr19:4292305-4292306(-) m6A 3'UTR       27371828 chr19:4292348-4292349(-) m6A 3'UTR       27371828 chr19:4292365-4292366(-) m6A 3'UTR       27371828 chr19:4292434-4292435(-) m6A 3'UTR       27371828 chr19:4292449-4292450(-) m6A 3'UTR       27371828 chr19:4292472-4292473(-) m6A 3'UTR       27371828 chr19:4292526-4292527(-) m6A 3'UTR       27371828 chr19:4292570-4292571(-) m6A 3'UTR       27371828 chr19:4292581-4292582(-) m6A 3'UTR       27371828 chr19:4292652-4292653(-) m6A CDS       27371828 chr19:4298210-4298211(-) m6A CDS//intron       27371828 chr19:4298248-4298249(-) m6A CDS//intron       27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMIGD2	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H22
Interactor2: TMIGD2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg