Basic Information:

  VIRBase ID:  

VHID00192416

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H22:  MIMAT0014704          ANKRD13B:  NM_152345     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H22	ANKRD13B
miRBase Accession/Entrez ID	MIMAT0014704	124930
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ANKRD13B	chr17:27932603(+) A-I      intronic chr17:27933497(+) A-I      intronic chr17:27933805(+) A-I      intronic chr17:27936962(+) A-I      intronic chr17:27936957(+) A-I      intronic chr17:27933979(+) A-I      intronic chr17:27933456(+) A-I      intronic chr17:27932696(+) A-I      intronic chr17:27930132(+) A-I      intronic chr17:27930110(+) A-I      intronic chr17:27936956(+) A-I      intronic chr17:27929969(+) A-I      intronic chr17:27933011(+) A-I      intronic chr17:27934043(+) A-I      intronic chr17:27931011(+) A-I      intronic chr17:27933110(+) A-I      intronic chr17:27933322(+) A-I      intronic chr17:27933947(+) A-I      intronic chr17:27932702(+) A-I      intronic chr17:27933948(+) A-I      intronic chr17:27933031(+) A-I      intronic chr17:27929914(+) A-I      intronic chr17:27930499(+) A-I      intronic chr17:27933415(+) A-I      intronic chr17:27929949(+) A-I      intronic chr17:27929302(+) A-I      intronic chr17:27933511(+) A-I      intronic chr17:27928081(+) A-I      intronic chr17:27932689(+) A-I      intronic chr17:27933496(+) A-I      intronic chr17:27932598(+) A-I      intronic chr17:27932536(+) A-I      intronic chr17:27933439(+) A-I      intronic chr17:27933348(+) A-I      intronic chr17:27930398(+) A-I      intronic chr17:27933677(+) A-I      intronic chr17:27934007(+) A-I      intronic chr17:27933362(+) A-I      intronic chr17:27933104(+) A-I      intronic chr17:27933654(+) A-I      intronic chr17:27933321(+) A-I      intronic chr17:27929998(+) A-I      intronic chr17:27933005(+) A-I      intronic chr17:27933367(+) A-I      intronic chr17:27933866(+) A-I      intronic chr17:27933048(+) A-I      intronic chr17:27933905(+) A-I      intronic chr17:27932579(+) A-I      intronic chr17:27933881(+) A-I      intronic chr17:27930283(+) A-I      intronic chr17:27933727(+) A-I      intronic chr17:27922141(+) A-I      intronic chr17:27933391(+) A-I      intronic chr17:27930481(+) A-I      intronic chr17:27933902(+) A-I      intronic chr17:27933455(+) A-I      intronic chr17:27933974(+) A-I      intronic chr17:27931326(+) A-I      intronic chr17:27932586(+) A-I      intronic chr17:27933680(+) A-I      intronic chr17:27932509(+) A-I      intronic chr17:27932661(+) A-I      intronic chr17:27933203(+) A-I      intronic chr17:27930008(+) A-I      intronic chr17:27933168(+) A-I      intronic chr17:27941376(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ANKRD13B	chr17:27935030-27935031(+) m6A 5'UTR//CDS//exon//intron       24284625 chr17:27935066-27935067(+) m6A 5'UTR//CDS//exon//intron       24284625 chr17:27935219-27935220(+) m6A 5'UTR//CDS//exon       24284625 chr17:27935928-27935929(+) m6A CDS//exon       24284625 chr17:27935940-27935941(+) m6A CDS//exon       24284625 chr17:27935985-27935986(+) m6A CDS//exon       24284625 chr17:27936159-27936160(+) m6A CDS//exon       24284625 chr17:27936181-27936182(+) m6A CDS//exon       24284625 chr17:27936221-27936222(+) m6A CDS//exon       24284625 chr17:27936354-27936355(+) m6A exon//intron       - chr17:27936374-27936375(+) m6A CDS//exon       - chr17:27936379-27936380(+) m6A CDS//exon       - chr17:27937744-27937745(+) m6A CDS//exon       - chr17:27937749-27937750(+) m6A CDS//exon       - chr17:27937761-27937762(+) m6A CDS//exon       - chr17:27938604-27938605(+) m6A CDS//exon       - chr17:27938908-27938909(+) m6A CDS//exon       - chr17:27939003-27939004(+) m6A CDS//exon       - chr17:27939464-27939465(+) m6A CDS//exon       24284625 chr17:27939483-27939484(+) m6A CDS//exon       24284625 chr17:27940042-27940043(+) m6A 3'UTR//intron       25456834 chr17:27940055-27940056(+) m6A 3'UTR//intron       25456834 chr17:27940077-27940078(+) m6A 3'UTR//intron       25456834 chr17:27940169-27940170(+) m6A 3'UTR//intron       25456834 chr17:27940503-27940504(+) m6A CDS//exon       24209618//25456834//22575960 chr17:27940614-27940615(+) m6A 3'UTR//exon       24209618//25456834//24981863//22575960//22608085 chr17:27940659-27940660(+) m6A 3'UTR//exon       24209618//25456834//24981863//22575960//22608085 chr17:27940699-27940700(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr17:27940993-27940994(+) m6A 3'UTR//exon//intron       24284625//22575960 chr17:27941081-27941082(+) m6A 3'UTR//exon//intron       24284625//22575960 chr17:27941087-27941088(+) m6A 3'UTR//exon//intron       24284625//22575960 chr17:27941377-27941378(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr17:27941387-27941388(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr17:27941392-27941393(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr17:27941492-27941493(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr17:27941504-27941505(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr17:27941572-27941573(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr17:27941625-27941626(+) m6A 3'UTR//exon       24284625//25456834//24981863//22575960//22608085 chr17:27941663-27941664(+) m6A 3'UTR//exon       24284625//25456834//24981863//22575960//22608085 chr17:27941688-27941689(+) m6A 3'UTR//exon       24284625//25456834//24981863//22575960//22608085 chr17:27941698-27941699(+) m6A 3'UTR//exon       24284625//25456834//24981863//22575960//22608085 chr17:27941739-27941740(+) m6A 3'UTR//exon       24284625//25456834//24981863//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ANKRD13B	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H22
Interactor2: ANKRD13B

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg