Basic Information:

  VIRBase ID:  

VHID00192342

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H22:  MIMAT0014704          BATF2:  NM_138456     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H22	BATF2
miRBase Accession/Entrez ID	MIMAT0014704	116071
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	SARI

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BATF2	chr11:64761469(-) A-I      intronic chr11:64758360(-) A-I      intronic chr11:64760205(-) A-I      intronic chr11:64758359(-) A-I      intronic chr11:64760216(-) A-I      intronic chr11:64760266(-) A-I      intronic chr11:64761383(-) A-I      intronic chr11:64761406(-) A-I      intronic chr11:64761543(-) A-I      intronic chr11:64761392(-) A-I      intronic chr11:64760211(-) A-I      intronic chr11:64760302(-) A-I      intronic chr11:64761388(-) A-I      intronic chr11:64760076(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BATF2	chr11:64755543-64755544(-) m6A 3'UTR//exon       27773535 chr11:64755574-64755575(-) m6A 3'UTR//exon       25456834//27773535 chr11:64755669-64755670(-) m6A 3'UTR//exon       25456834 chr11:64755703-64755704(-) m6A 3'UTR//exon       25456834 chr11:64755822-64755823(-) m6A 3'UTR//exon       27773535 chr11:64756125-64756126(-) m6A 3'UTR//exon       27371828 chr11:64756930-64756931(-) m6A CDS//exon       24981863//27371828 chr11:64757049-64757050(-) m6A CDS//exon       24981863//27371828//27773536 chr11:64757086-64757087(-) m6A CDS//exon       25456834//27371828//27773536 chr11:64757123-64757124(-) m6A CDS//exon       25456834//27371828//27773536 chr11:64757199-64757200(-) m6A 5'UTR//CDS//exon       25456834//27371828 chr11:64757261-64757262(-) m6A 5'UTR//CDS//exon       27371828//27773536 chr11:64757363-64757364(-) m6A exon//intron       27371828 chr11:64757414-64757415(-) m6A exon//intron       - chr11:64757967-64757968(-) m6A exon//intron       27371828 chr11:64761941-64761942(-) m6A CDS       27371828 chr11:64761980-64761981(-) m6A CDS       25456834//27371828 chr11:64764349-64764350(-) m6A CDS       25456834//27371828 chr11:64764410-64764411(-) m6A 5'UTR       27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BATF2	Chromatin K562 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H22
Interactor2: BATF2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg