Basic Information:

  VIRBase ID:  

VHID00192318

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H22:  MIMAT0014704          C1QTNF2:  NM_031908     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H22	C1QTNF2
miRBase Accession/Entrez ID	MIMAT0014704	114898
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CTRP2//zacrp2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	C1QTNF2	chr5:159777561(-) A-I      intronic chr5:159777882(-) A-I      intronic chr5:159778038(-) A-I      intronic chr5:159781106(-) A-I      intronic chr5:159781054(-) A-I      intronic chr5:159774959(-) A-I      3'UTR chr5:159774935(-) A-I      3'UTR chr5:159774983(-) A-I      3'UTR chr5:159774991(-) A-I      3'UTR chr5:159774904(-) A-I      3'UTR chr5:159774863(-) A-I      3'UTR chr5:159774843(-) A-I      3'UTR chr5:159778052(-) A-I      intronic chr5:159786031(-) A-I      intronic chr5:159780988(-) A-I      intronic chr5:159793861(-) A-I      intronic chr5:159781322(-) A-I      intronic chr5:159777528(-) A-I      intronic chr5:159777560(-) A-I      intronic chr5:159774982(-) A-I      3'UTR chr5:159775037(-) A-I      3'UTR chr5:159779117(-) A-I      intronic chr5:159777466(-) A-I      intronic chr5:159777600(-) A-I      intronic chr5:159777854(-) A-I      intronic chr5:159781075(-) A-I      intronic chr5:159780907(-) A-I      intronic chr5:159786056(-) A-I      intronic chr5:159785633(-) A-I      intronic chr5:159781499(-) A-I      intronic chr5:159777507(-) A-I      intronic chr5:159777587(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	C1QTNF2	chr5:159795294(-) C-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	C1QTNF2	chr5:159774956-159774957(-) m6A 3'UTR       24209618 chr5:159774979-159774980(-) m6A 3'UTR       24209618 chr5:159775027-159775028(-) m6A 3'UTR       24209618 chr5:159775429-159775430(-) m6A 3'UTR       25456834 chr5:159775464-159775465(-) m6A 3'UTR       25456834 chr5:159776112-159776113(-) m6A 3'UTR       24209618//25456834 chr5:159776132-159776133(-) m6A 3'UTR       24209618//25456834 chr5:159776144-159776145(-) m6A 3'UTR       24209618//25456834 chr5:159776173-159776174(-) m6A 3'UTR       24209618//25456834 chr5:159776236-159776237(-) m6A CDS       24209618//25456834 chr5:159776368-159776369(-) m6A CDS       24209618 chr5:159776750-159776751(-) m6A CDS       25456834 chr5:159776773-159776774(-) m6A CDS       25456834 chr5:159781788-159781789(-) m6A CDS       25456834 chr5:159781808-159781809(-) m6A CDS       25456834 chr5:159781941-159781942(-) m6A CDS       - chr5:159797635-159797636(-) m6A CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	C1QTNF2	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H22
Interactor2: C1QTNF2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg