Basic Information:

  VIRBase ID:  

VHID00192200

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H22:  MIMAT0014704          CHMP7:  NM_152272     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H22	CHMP7
miRBase Accession/Entrez ID	MIMAT0014704	91782
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CHMP7	chr8:23103882-23103883(+) m6A 5'UTR       - chr8:23103956-23103957(+) m6A 5'UTR       25456834//24981863 chr8:23104005-23104006(+) m6A 5'UTR       25456834//24981863 chr8:23104062-23104063(+) m6A 5'UTR       24284625//25456834//24981863 chr8:23104071-23104072(+) m6A 5'UTR       25456834//24981863 chr8:23104161-23104162(+) m6A 5'UTR       24284625//25456834//24981863 chr8:23104251-23104252(+) m6A CDS//exon       24284625//24981863 chr8:23104341-23104342(+) m6A CDS//exon//intron       - chr8:23104356-23104357(+) m6A CDS//exon//intron       - chr8:23104434-23104435(+) m6A CDS//exon//intron       25456834 chr8:23104497-23104498(+) m6A CDS//exon//intron       25456834 chr8:23106748-23106749(+) m6A CDS//intron       24209618 chr8:23106766-23106767(+) m6A CDS//intron       24209618 chr8:23112793-23112794(+) m6A 3'UTR//CDS//exon       24284625 chr8:23114058-23114059(+) m6A 3'UTR//CDS//exon//intron       24981863 chr8:23114123-23114124(+) m6A exon//intron       24981863 chr8:23115872-23115873(+) m6A 3'UTR//CDS//exon       24981863 chr8:23115909-23115910(+) m6A 3'UTR//CDS//exon       24981863 chr8:23115930-23115931(+) m6A 3'UTR//CDS//exon       24981863 chr8:23115950-23115951(+) m6A 3'UTR//CDS//exon       24981863 chr8:23117689-23117690(+) m6A 3'UTR//CDS//exon       24284625 chr8:23117717-23117718(+) m6A 3'UTR//CDS//exon       24284625 chr8:23117795-23117796(+) m6A 3'UTR//CDS//exon       24284625//24981863//22608085 chr8:23117807-23117808(+) m6A 3'UTR//CDS//exon       24284625//24981863//22608085 chr8:23117816-23117817(+) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//26404942//27773535//22608085 chr8:23118090-23118091(+) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr8:23118113-23118114(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr8:23118128-23118129(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr8:23118147-23118148(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr8:23118181-23118182(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr8:23118188-23118189(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr8:23118223-23118224(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr8:23118261-23118262(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr8:23118317-23118318(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22575960//22608085 chr8:23118867-23118868(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22608085 chr8:23118883-23118884(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22608085 chr8:23118961-23118962(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22608085 chr8:23119193-23119194(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr8:23119201-23119202(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr8:23119216-23119217(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CHMP7	Chromatin K562 cells     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H22
Interactor2: CHMP7

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg