Basic Information:

  VIRBase ID:  

VHID00191447

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H22:  MIMAT0014704          NOD2:  NR_163434     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H22	NOD2
miRBase Accession/Entrez ID	MIMAT0014704	64127
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ACUG//BLAU//BLAUS//CARD15//CD//CLR16.3//IBD1//NLRC2//NOD2B//PSORAS1//YAOS

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NOD2	chr16:50736021(+) A-I      intronic chr16:50736022(+) A-I      intronic chr16:50736084(+) A-I      intronic chr16:50737544(+) A-I      intronic chr16:50736041(+) A-I      intronic chr16:50737365(+) A-I      intronic chr16:50738531(+) A-I      intronic chr16:50735986(+) A-I      intronic chr16:50738545(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NOD2	chr16:50733497-50733498(+) m6A 3'UTR//CDS//exon       - chr16:50733533-50733534(+) m6A 3'UTR//CDS//exon       - chr16:50733776-50733777(+) m6A 3'UTR//CDS//exon       - chr16:50733785-50733786(+) m6A 3'UTR//CDS//exon       - chr16:50744503-50744504(+) m6A 3'UTR//CDS//exon       - chr16:50744570-50744571(+) m6A 3'UTR//CDS//exon       - chr16:50744622-50744623(+) m6A 3'UTR//CDS//exon       - chr16:50744699-50744700(+) m6A 3'UTR//CDS//exon       - chr16:50744783-50744784(+) m6A CDS//exon       - chr16:50744844-50744845(+) m6A CDS//exon       - chr16:50744860-50744861(+) m6A CDS//exon       - chr16:50744906-50744907(+) m6A CDS       - chr16:50745168-50745169(+) m6A CDS       - chr16:50745221-50745222(+) m6A CDS       - chr16:50745247-50745248(+) m6A CDS       - chr16:50745315-50745316(+) m6A CDS       - chr16:50745346-50745347(+) m6A CDS       - chr16:50745407-50745408(+) m6A CDS       - chr16:50745429-50745430(+) m6A CDS       - chr16:50745477-50745478(+) m6A CDS       - chr16:50745702-50745703(+) m6A CDS       - chr16:50745788-50745789(+) m6A CDS       - chr16:50745904-50745905(+) m6A CDS       - chr16:50746214-50746215(+) m6A CDS       - chr16:50765710-50765711(+) m6A CDS       - chr16:50765717-50765718(+) m6A CDS       - chr16:50765851-50765852(+) m6A 3'UTR       - chr16:50765866-50765867(+) m6A 3'UTR       - chr16:50765924-50765925(+) m6A 3'UTR       - chr16:50765988-50765989(+) m6A 3'UTR       - chr16:50766012-50766013(+) m6A 3'UTR       - chr16:50766119-50766120(+) m6A 3'UTR       - chr16:50766157-50766158(+) m6A 3'UTR       - chr16:50766243-50766244(+) m6A 3'UTR       - chr16:50766388-50766389(+) m6A 3'UTR       - chr16:50766404-50766405(+) m6A 3'UTR       - chr16:50766431-50766432(+) m6A 3'UTR       - chr16:50766486-50766487(+) m6A 3'UTR       - chr16:50766534-50766535(+) m6A 3'UTR       - chr16:50766631-50766632(+) m6A 3'UTR       - chr16:50766636-50766637(+) m6A 3'UTR       - chr16:50766649-50766650(+) m6A 3'UTR       - chr16:50766662-50766663(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NOD2	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H22
Interactor2: NOD2

Evidence Support:

Prediction-Evidence	miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg