Basic Information:

  VIRBase ID:  

VHID00189195

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H22:  MIMAT0014704          TM7SF2:  NR_102367     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H22	TM7SF2
miRBase Accession/Entrez ID	MIMAT0014704	7108
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ANG1//C14SR//DHCR14A//NET47

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TM7SF2	chr11:64879484-64879485(+) m6A 5'UTR//exon//intron       - chr11:64879560-64879561(+) m6A exon//intron       - chr11:64879602-64879603(+) m6A exon//intron       - chr11:64879661-64879662(+) m6A exon//intron       25456834 chr11:64879795-64879796(+) m6A exon//intron       25456834 chr11:64879820-64879821(+) m6A exon//intron       25456834 chr11:64881041-64881042(+) m6A 3'UTR//CDS//exon//intron       - chr11:64883583-64883584(+) m6A 3'UTR//exon       24981863//27773535//22608085 chr11:64883607-64883608(+) m6A 3'UTR//exon       25456834//24981863//27773535//22608085 chr11:64883644-64883645(+) m6A 3'UTR//exon       25456834//24981863//27773535//22608085 chr11:64883688-64883689(+) m6A 3'UTR//exon       25456834//24981863//27773535//22608085 chr11:64883730-64883731(+) m6A 3'UTR       25456834//24981863//22608085 chr11:64883739-64883740(+) m6A 3'UTR       25456834//24981863//22608085 chr11:64883766-64883767(+) m6A 3'UTR       25456834//24981863//22608085 chr11:64883840-64883841(+) m6A 3'UTR       25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TM7SF2	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleus HCC cell line (HepG2)     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H22
Interactor2: TM7SF2

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg