Basic Information:

  VIRBase ID:  

VHID00189142

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H22:  MIMAT0014704          TBCC:  NM_003192     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H22	TBCC
miRBase Accession/Entrez ID	MIMAT0014704	6903
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CFC

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TBCC	chr6:42712558-42712559(-) m6A 3'UTR       27773535 chr6:42712721-42712722(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr6:42712774-42712775(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:42712816-42712817(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:42712888-42712889(-) Tm CDS       - chr6:42712906-42712907(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:42712963-42712964(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr6:42713008-42713009(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr6:42713068-42713069(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr6:42713160-42713161(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr6:42713181-42713182(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr6:42713281-42713282(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr6:42713311-42713312(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr6:42713390-42713391(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr6:42713472-42713473(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr6:42713523-42713524(-) m6A CDS       24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr6:42713644-42713645(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr6:42713665-42713666(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr6:42713679-42713680(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr6:42713712-42713713(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr6:42713749-42713750(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr6:42713767-42713768(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085 chr6:42713774-42713775(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TBCC	Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H22
Interactor2: TBCC

Evidence Support:

Prediction-Evidence	cRep//RNAHybrid
Support Database	RepTar//VmiReg