Basic Information:

  VIRBase ID:  

VHID00188048

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H22:  MIMAT0014704          EFNA3:  NM_004952     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H22	EFNA3
miRBase Accession/Entrez ID	MIMAT0014704	1944
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	EFL2//Ehk1-L//EPLG3//LERK3

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	EFNA3	chr1:155058000-155058001(+) m6A exon//intron       - chr1:155058891-155058892(+) m6A CDS//exon       - chr1:155058906-155058907(+) m6A CDS//exon       - chr1:155058944-155058945(+) m6A CDS//exon       - chr1:155058961-155058962(+) m6A CDS//exon       - chr1:155059641-155059642(+) m6A 3'UTR       - chr1:155059669-155059670(+) m6A 3'UTR       - chr1:155059731-155059732(+) m6A 3'UTR       24284625 chr1:155059770-155059771(+) m6A 3'UTR       24284625 chr1:155059802-155059803(+) m6A 3'UTR       24284625 chr1:155059807-155059808(+) m6A 3'UTR       24284625 chr1:155059824-155059825(+) m6A 3'UTR       24284625 chr1:155059836-155059837(+) m6A 3'UTR       24284625 chr1:155059844-155059845(+) m6A 3'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	EFNA3	Chromatin K562 cells     - Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H22
Interactor2: EFNA3

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg