Basic Information:

  VIRBase ID:  

VHID00186966

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H20:  MIMAT0014702          FAM43B:  NM_207334     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H20	FAM43B
miRBase Accession/Entrez ID	MIMAT0014702	163933
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FAM43B	chr1:20879590-20879591(+) m6A CDS       25456834 chr1:20880466-20880467(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr1:20880471-20880472(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr1:20880499-20880500(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr1:20880689-20880690(+) m6A 3'UTR       24209618//24981863 chr1:20880730-20880731(+) m6A 3'UTR       24209618//24981863 chr1:20880751-20880752(+) m6A 3'UTR       24209618//24981863 chr1:20880808-20880809(+) m6A 3'UTR       24209618//25456834 chr1:20881020-20881021(+) m6A 3'UTR       24981863 chr1:20881053-20881054(+) m6A 3'UTR       24981863 chr1:20881081-20881082(+) m6A 3'UTR       24981863 chr1:20881222-20881223(+) m6A 3'UTR       25456834//24981863 chr1:20881255-20881256(+) m6A 3'UTR       25456834//24981863//22608085 chr1:20881275-20881276(+) m6A 3'UTR       25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FAM43B	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H20
Interactor2: FAM43B

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Targetscan
Support Database	RepTar//VmiReg