Detail Information

Basic Information:


  VIRBase ID:  

VHID00186664

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H20:           ZNF594:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H20 ZNF594
miRBase
Accession/Entrez ID		 MIMAT0014702 84622
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ZNF594
chr17:5093600(-) A-I      intronic
chr17:5092081(-) A-I      intronic
chr17:5092080(-) A-I      intronic
chr17:5092115(-) A-I      intronic
chr17:5092148(-) A-I      intronic
chr17:5092220(-) A-I      intronic
chr17:5092237(-) A-I      intronic
chr17:5092309(-) A-I      intronic
chr17:5092619(-) A-I      intronic
chr17:5092640(-) A-I      intronic
chr17:5092645(-) A-I      intronic
chr17:5093581(-) A-I      intronic
chr17:5092658(-) A-I      intronic
chr17:5093551(-) A-I      intronic
chr17:5093601(-) A-I      intronic
chr17:5093640(-) A-I      intronic
chr17:5083871(-) A-I      3'UTR
chr17:5092514(-) A-I      intronic
chr17:5093408(-) A-I      intronic
chr17:5092981(-) A-I      intronic
chr17:5093661(-) A-I      intronic
chr17:5092844(-) A-I      intronic
chr17:5092223(-) A-I      intronic
chr17:5092605(-) A-I      intronic
chr17:5093515(-) A-I      intronic
chr17:5083955(-) A-I      3'UTR
chr17:5083948(-) A-I      3'UTR
chr17:5092154(-) A-I      intronic
chr17:5083621(-) A-I      3'UTR
chr17:5092836(-) A-I      intronic
chr17:5093580(-) A-I      intronic
chr17:5092315(-) A-I      intronic
chr17:5092472(-) A-I      intronic
chr17:5083907(-) A-I      3'UTR
chr17:5093396(-) A-I      intronic
chr17:5083644(-) A-I      3'UTR
chr17:5093063(-) A-I      intronic
chr17:5092944(-) A-I      intronic
chr17:5083452(-) A-I      3'UTR
chr17:5093587(-) A-I      intronic
chr17:5092314(-) A-I      intronic
chr17:5093085(-) A-I      intronic
chr17:5092226(-) A-I      intronic
chr17:5083516(-) A-I      3'UTR
chr17:5093059(-) A-I      intronic
chr17:5093418(-) A-I      intronic
chr17:5083494(-) A-I      3'UTR
chr17:5092680(-) A-I      intronic
chr17:5093405(-) A-I      intronic
chr17:5092959(-) A-I      intronic
chr17:5093427(-) A-I      intronic
chr17:5092807(-) A-I      intronic
chr17:5092843(-) A-I      intronic
chr17:5093606(-) A-I      intronic
chr17:5092181(-) A-I      intronic
chr17:5093046(-) A-I      intronic
chr17:5092221(-) A-I      intronic
chr17:5092798(-) A-I      intronic
chr17:5092207(-) A-I      intronic
chr17:5092806(-) A-I      intronic
chr17:5093492(-) A-I      intronic
chr17:5093417(-) A-I      intronic
chr17:5092902(-) A-I      intronic
chr17:5092614(-) A-I      intronic
chr17:5093563(-) A-I      intronic
chr17:5093451(-) A-I      intronic
chr17:5092985(-) A-I      intronic
chr17:5093108(-) A-I      intronic
chr17:5092922(-) A-I      intronic
chr17:5092833(-) A-I      intronic
chr17:5092271(-) A-I      intronic
chr17:5092468(-) A-I      intronic
chr17:5093086(-) A-I      intronic
chr17:5092841(-) A-I      intronic
chr17:5093632(-) A-I      intronic
chr17:5083472(-) A-I      3'UTR
chr17:5083520(-) A-I      3'UTR
chr17:5083637(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ZNF594
chr17:5083637(-) A-I exon 3'UTR    15258596
chr17:5083907(-) A-I exon 3'UTR    15258596
chr17:5083948(-) A-I exon 3'UTR    15258596
chr17:5092271(-) A-G intron -    22484847
chr17:5092468(-) A-G intron -    22484847
chr17:5092472(-) A-G intron -    22484847
chr17:5092605(-) A-G intron -    22484847
chr17:5092806(-) A-G intron -    22484847
chr17:5093046(-) A-G intron -    22484847
chr17:5093086(-) A-G intron -    22484847
chr17:5093417(-) A-G intron -    22484847
chr17:5093632(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZNF594
chr17:5084024-5084025(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr17:5084055-5084056(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr17:5084142-5084143(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr17:5084184-5084185(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr17:5084205-5084206(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr17:5084224-5084225(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr17:5084247-5084248(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr17:5084252-5084253(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr17:5084269-5084270(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr17:5084295-5084296(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr17:5084318-5084319(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr17:5084361-5084362(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr17:5084404-5084405(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr17:5084445-5084446(-) m6A 3'UTR       24284625//25456834//27773535//22608085
chr17:5084472-5084473(-) m6A 3'UTR       24284625//27773535//22608085
chr17:5084529-5084530(-) m6A 3'UTR       24284625//27773535//22608085
chr17:5084556-5084557(-) m6A 3'UTR       24284625//22608085
chr17:5084566-5084567(-) m6A 3'UTR       24284625//22608085
chr17:5084585-5084586(-) m6A 3'UTR       24284625//22608085
chr17:5084613-5084614(-) m6A 3'UTR       24284625//27773535//22608085
chr17:5084640-5084641(-) m6A 3'UTR       24284625//27773535//22608085
chr17:5084650-5084651(-) m6A 3'UTR       24284625//27773535//22608085
chr17:5084753-5084754(-) m6A 3'UTR       24284625//25456834//27773535//22608085
chr17:5084772-5084773(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr17:5084790-5084791(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr17:5084799-5084800(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr17:5084829-5084830(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr17:5084856-5084857(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr17:5085024-5085025(-) m6A 3'UTR       22608085
chr17:5085051-5085052(-) m6A 3'UTR       22608085
chr17:5085108-5085109(-) m6A 3'UTR       22608085
chr17:5085135-5085136(-) m6A CDS       27773535//22608085
chr17:5085145-5085146(-) m6A CDS       27773535//22608085
chr17:5085162-5085163(-) m6A CDS       24981863//27773535//22608085
chr17:5085190-5085191(-) m6A CDS       24981863//27773535//22608085
chr17:5085217-5085218(-) m6A CDS       24981863//27773535//22608085
chr17:5085246-5085247(-) m6A CDS       24284625//24981863//27773535//22608085
chr17:5085291-5085292(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085
chr17:5085330-5085331(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr17:5085349-5085350(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085
chr17:5085367-5085368(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085
chr17:5085376-5085377(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085
chr17:5085406-5085407(-) m6A CDS       24284625//25456834//24981863//27773535//22608085
chr17:5085433-5085434(-) m6A CDS       24284625//24981863//27773535//22608085
chr17:5085451-5085452(-) m6A CDS       24284625//24981863//27773535//22608085
chr17:5085909-5085910(-) m6A CDS       -
chr17:5085925-5085926(-) m6A CDS       -
chr17:5085952-5085953(-) m6A CDS       -
chr17:5086261-5086262(-) m6A CDS       22608085
chr17:5086288-5086289(-) m6A CDS       22608085
chr17:5086298-5086299(-) m6A CDS       22608085
chr17:5086317-5086318(-) m6A CDS       22608085
chr17:5086345-5086346(-) m6A CDS       22608085
chr17:5086372-5086373(-) m6A CDS       27773535//22608085
chr17:5086382-5086383(-) m6A CDS       27773535//22608085
chr17:5086485-5086486(-) m6A CDS       27773535//27371828//22608085
chr17:5086531-5086532(-) m6A CDS       27773535//27371828//22608085
chr17:5086560-5086561(-) m6A CDS       27773535//27371828//22608085
chr17:5086588-5086589(-) m6A CDS       27773535//27371828//22608085
chr17:5086606-5086607(-) m6A CDS       27773535//27371828//22608085
chr17:5086615-5086616(-) m6A CDS       27773535//27371828//22608085
chr17:5086672-5086673(-) m6A CDS       27773535//22608085
chr17:5086732-5086733(-) m6A CDS       27773535//22608085
chr17:5086756-5086757(-) m6A CDS       27773535//22608085
chr17:5086877-5086878(-) m6A CDS       24284625//27773535//22608085
chr17:5086951-5086952(-) m6A CDS       24284625//25456834//24981863//27773535//22575960//22608085
chr17:5086979-5086980(-) m6A CDS       24284625//25456834//24981863//27773535//22575960//22608085
chr17:5087008-5087009(-) m6A CDS       24284625//24981863//27773535//22575960//22608085
chr17:5087063-5087064(-) m6A CDS       24284625//24981863//27773535//22575960//22608085
chr17:5087129-5087130(-) m6A CDS       24981863//27773535//22608085
chr17:5087148-5087149(-) m6A CDS       24981863//27773535//22608085
chr17:5087175-5087176(-) m6A CDS       24981863//27773535//22608085
chr17:5087203-5087204(-) m6A CDS       24981863//27773535//22608085
chr17:5087224-5087225(-) m6A CDS       24284625//24981863//27773535//22608085
chr17:5087231-5087232(-) m6A CDS       24284625//24981863//27773535//22608085
chr17:5087380-5087381(-) m6A CDS       24284625//25456834//24981863//27773535//22575960//22608085
chr17:5087426-5087427(-) m6A CDS       24284625//25456834//24981863//27773535//22575960//22608085
chr17:5087442-5087443(-) m6A CDS       24284625//25456834//24981863//27773535//22575960//22608085
chr17:5087473-5087474(-) m6A CDS       24284625//25456834//24981863//27773535//22575960//22608085
chr17:5087482-5087483(-) m6A CDS       24284625//25456834//24981863//27773535//22575960//22608085
chr17:5087561-5087562(-) m6A 5'UTR       24284625//25456834//22608085
chr17:5094936-5094937(-) m6A 5'UTR//intron       25456834//27773536
chr17:5095036-5095037(-) m6A 5'UTR//intron       24284625//27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ZNF594
Exosome Blood     -
Nucleus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H20
Interactor2: ZNF594

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//Targetscan
Support Database RepTar//VmiReg

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