Basic Information:

  VIRBase ID:  

VHID00184846

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H20:  MIMAT0014702          BRDT:  NM_001242805     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H20	BRDT
miRBase Accession/Entrez ID	MIMAT0014702	676
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BRD6//CT9//SPGF21

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BRDT	chr1:92420501(+) A-I      intronic chr1:92417237(+) A-I      intronic chr1:92417249(+) A-I      intronic chr1:92420488(+) A-I      intronic chr1:92428016(+) A-I      intronic chr1:92427460(+) A-I      intronic chr1:92420805(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	BRDT	chr1:92444548(+) A-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BRDT	chr1:92442776-92442777(+) m6A CDS//exon       27773535 chr1:92442793-92442794(+) m6A CDS//exon       27773535 chr1:92442841-92442842(+) m6A CDS//exon       27773535 chr1:92442895-92442896(+) m6A CDS//exon       27773535 chr1:92445255-92445256(+) m6A CDS       27773535 chr1:92446463-92446464(+) m6A CDS       27773535 chr1:92446508-92446509(+) m6A CDS       27773535 chr1:92446516-92446517(+) m6A CDS       27773535 chr1:92446552-92446553(+) m6A CDS       27773535 chr1:92446571-92446572(+) m6A CDS       27773535 chr1:92446648-92446649(+) m6A CDS       27773535 chr1:92446656-92446657(+) m6A CDS       27773535 chr1:92446718-92446719(+) m6A CDS       27773535 chr1:92446727-92446728(+) m6A CDS       27773535 chr1:92446852-92446853(+) m6A CDS       27773535 chr1:92446870-92446871(+) m6A CDS       27773535 chr1:92457856-92457857(+) m6A CDS       27773535 chr1:92459658-92459659(+) m6A CDS       27773535 chr1:92459693-92459694(+) m6A CDS       27773535 chr1:92470014-92470015(+) m6A CDS       27773535 chr1:92470023-92470024(+) m6A CDS       27773535 chr1:92470105-92470106(+) m6A CDS       27773535 chr1:92470113-92470114(+) m6A CDS       27773535 chr1:92470134-92470135(+) m6A CDS       27773535 chr1:92470149-92470150(+) m6A CDS       27773535 chr1:92470725-92470726(+) m6A CDS       27773535 chr1:92470753-92470754(+) m6A CDS       27773535 chr1:92470789-92470790(+) m6A CDS       27773535 chr1:92470806-92470807(+) m6A CDS       27773535 chr1:92470831-92470832(+) m6A CDS       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BRDT	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H20
Interactor2: BRDT

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg