Basic Information:

  VIRBase ID:  

VHID00184634

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H19:  MIMAT0014701          B3GALT5:  NM_001278650     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H19	B3GALT5
miRBase Accession/Entrez ID	MIMAT0014701	10317
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	B3GalT-V//B3GalTx//B3T5//beta-1,3-GalTase 5//beta-3-Gx-T5//beta3Gal-T5//GLCT5

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	B3GALT5	chr21:40977134-40977135(+) m6A 5'UTR       25456834//24981863 chr21:41018344-41018345(+) m6A 5'UTR//intron       25456834//24981863 chr21:41032584-41032585(+) m6A CDS       25456834//24981863 chr21:41032613-41032614(+) m6A CDS       25456834//24981863 chr21:41032637-41032638(+) m6A CDS       25456834//24981863 chr21:41032648-41032649(+) m6A CDS       25456834//24981863 chr21:41032689-41032690(+) m6A CDS       25456834//24981863 chr21:41032762-41032763(+) m6A CDS       25456834//24981863 chr21:41032780-41032781(+) m6A CDS       25456834//24981863 chr21:41032814-41032815(+) m6A CDS       25456834//24981863 chr21:41032838-41032839(+) m6A CDS       25456834//24981863 chr21:41032888-41032889(+) m6A CDS       25456834//24981863 chr21:41032948-41032949(+) m6A CDS       25456834//24981863 chr21:41032958-41032959(+) m6A CDS       25456834//24981863 chr21:41032989-41032990(+) m6A CDS       25456834//24981863 chr21:41033006-41033007(+) m6A CDS       25456834//24981863 chr21:41033011-41033012(+) m6A CDS       25456834//24981863 chr21:41033040-41033041(+) m6A CDS       25456834//24981863 chr21:41033246-41033247(+) m6A CDS       25456834 chr21:41033356-41033357(+) m6A CDS       25456834//24981863 chr21:41033366-41033367(+) m6A CDS       25456834//24981863 chr21:41033442-41033443(+) m6A 3'UTR       25456834 chr21:41033500-41033501(+) m6A 3'UTR       25456834 chr21:41033721-41033722(+) m6A 3'UTR       25456834//24981863 chr21:41033747-41033748(+) m6A 3'UTR       25456834//24981863 chr21:41033835-41033836(+) m6A 3'UTR       25456834//24981863 chr21:41033868-41033869(+) m6A 3'UTR       25456834//24981863 chr21:41034110-41034111(+) m6A 3'UTR       24981863 chr21:41034124-41034125(+) m6A 3'UTR       24981863 chr21:41034160-41034161(+) m6A 3'UTR       24981863 chr21:41034187-41034188(+) m6A 3'UTR       25456834//24981863 chr21:41034221-41034222(+) m6A 3'UTR       25456834//24981863 chr21:41034293-41034294(+) m6A 3'UTR       25456834//24981863 chr21:41034335-41034336(+) m6A 3'UTR       25456834//24981863 chr21:41034343-41034344(+) m6A 3'UTR       25456834//24981863 chr21:41034351-41034352(+) m6A 3'UTR       25456834//24981863 chr21:41034427-41034428(+) m6A 3'UTR       25456834//24981863 chr21:41034540-41034541(+) m6A 3'UTR       25456834 chr21:41034548-41034549(+) m6A 3'UTR       25456834 chr21:41034746-41034747(+) m6A 3'UTR       24981863 chr21:41034804-41034805(+) m6A 3'UTR       24981863 chr21:41034809-41034810(+) m6A 3'UTR       24981863 chr21:41034821-41034822(+) m6A 3'UTR       24981863 chr21:41035290-41035291(+) m6A 3'UTR       25456834 chr21:41035300-41035301(+) m6A 3'UTR       25456834 chr21:41035355-41035356(+) m6A 3'UTR       25456834 chr21:41043769-41043770(+) m6A 3'UTR       25456834 chr21:41043806-41043807(+) m6A 3'UTR       25456834 chr21:41043887-41043888(+) m6A 3'UTR       25456834//24981863 chr21:41043895-41043896(+) m6A 3'UTR       25456834//24981863 chr21:41043946-41043947(+) m6A 3'UTR       24981863 chr21:41043980-41043981(+) m6A 3'UTR       24981863 chr21:41044088-41044089(+) m6A 3'UTR       25456834//24981863 chr21:41044104-41044105(+) m6A 3'UTR       25456834//24981863 chr21:41044184-41044185(+) m6A 3'UTR       25456834//24981863 chr21:41044264-41044265(+) m6A 3'UTR       24981863 chr21:41044315-41044316(+) m6A 3'UTR       24981863 chr21:41044347-41044348(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	B3GALT5	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H19
Interactor2: B3GALT5

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg