Basic Information:

  VIRBase ID:  

VHID00183793

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H13:  MIMAT0014700          POMGNT2:  NM_032806     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H13	POMGNT2
miRBase Accession/Entrez ID	MIMAT0014700	84892
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AGO61//C3orf39//GTDC2//MDDGA8//MDDGC8

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	POMGNT2	chr3:43120748-43120749(-) m6A 3'UTR       27773535//22608085 chr3:43120838-43120839(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr3:43120900-43120901(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22608085 chr3:43120973-43120974(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:43121000-43121001(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:43121091-43121092(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr3:43121101-43121102(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr3:43121213-43121214(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:43121277-43121278(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:43121295-43121296(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr3:43121328-43121329(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27371828//27773536//22575960//22608085 chr3:43121391-43121392(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27371828//27773536//22575960//22608085 chr3:43121494-43121495(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr3:43121513-43121514(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr3:43121545-43121546(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:43121565-43121566(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:43121577-43121578(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:43121607-43121608(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:43121670-43121671(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr3:43121724-43121725(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr3:43121739-43121740(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr3:43121763-43121764(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr3:43121949-43121950(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:43121971-43121972(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:43122033-43122034(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr3:43122040-43122041(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr3:43122259-43122260(-) m6A CDS       24284625 chr3:43122552-43122553(-) m6A CDS       24284625//27773535 chr3:43122696-43122697(-) m6A CDS       24284625//27773536 chr3:43132004-43132005(-) m6A 5'UTR//intron       24284625 chr3:43132058-43132059(-) m6A 5'UTR//intron       27773536 chr3:43147472-43147473(-) m6A 5'UTR       27773536 chr3:43147490-43147491(-) m6A 5'UTR       27773536 chr3:43147524-43147525(-) m6A 5'UTR       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	POMGNT2	Chromatin K562 cells     - Cytosol HeLa-S3 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H13
Interactor2: POMGNT2

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg