Basic Information:

  VIRBase ID:  

VHID00182303

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H13:  MIMAT0014700          SYT7:  NM_001300773     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H13	SYT7
miRBase Accession/Entrez ID	MIMAT0014700	9066
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	IPCA-7//IPCA7//PCANAP7//SYT-VII//SYTVII

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SYT7	chr11:61326386(-) A-I      intronic chr11:61326385(-) A-I      intronic chr11:61326394(-) A-I      intronic chr11:61326352(-) A-I      intronic chr11:61326398(-) A-I      intronic chr11:61299122(-) A-I      intronic chr11:61326382(-) A-I      intronic chr11:61287328(-) A-I      intronic chr11:61287345(-) A-I      intronic chr11:61287400(-) A-I      intronic chr11:61288112(-) A-I      intronic chr11:61289855(-) A-I      intronic chr11:61325890(-) A-I      intronic chr11:61287811(-) A-I      intronic chr11:61287404(-) A-I      intronic chr11:61287604(-) A-I      intronic chr11:61325772(-) A-I      intronic chr11:61287952(-) A-I      intronic chr11:61288173(-) A-I      intronic chr11:61299196(-) A-I      intronic chr11:61299200(-) A-I      intronic chr11:61287475(-) A-I      intronic chr11:61288417(-) A-I      intronic chr11:61325936(-) A-I      intronic chr11:61326489(-) A-I      intronic chr11:61287839(-) A-I      intronic chr11:61326379(-) A-I      intronic chr11:61288132(-) A-I      intronic chr11:61288293(-) A-I      intronic chr11:61325812(-) A-I      intronic chr11:61287382(-) A-I      intronic chr11:61325684(-) A-I      intronic chr11:61292559(-) A-I      intronic chr11:61287854(-) A-I      intronic chr11:61288051(-) A-I      intronic chr11:61299109(-) A-I      intronic chr11:61325813(-) A-I      intronic chr11:61288187(-) A-I      intronic chr11:61325938(-) A-I      intronic chr11:61326384(-) A-I      intronic chr11:61326466(-) A-I      intronic chr11:61287929(-) A-I      intronic chr11:61287389(-) A-I      intronic chr11:61297327(-) A-I      intronic chr11:61287358(-) A-I      intronic chr11:61287308(-) A-I      intronic chr11:61289856(-) A-I      intronic chr11:61288781(-) A-I      intronic chr11:61311491(-) A-I      intronic chr11:61287951(-) A-I      intronic chr11:61310801(-) A-I      intronic chr11:61288129(-) A-I      intronic chr11:61326389(-) A-I      intronic chr11:61287936(-) A-I      intronic chr11:61288232(-) A-I      intronic chr11:61288259(-) A-I      intronic chr11:61287889(-) A-I      intronic chr11:61287472(-) A-I      intronic chr11:61326411(-) A-I      intronic chr11:61288052(-) A-I      intronic chr11:61288040(-) A-I      intronic chr11:61299717(-) A-I      intronic chr11:61310657(-) A-I      intronic chr11:61289844(-) A-I      intronic chr11:61287365(-) A-I      intronic chr11:61288248(-) A-I      intronic chr11:61325754(-) A-I      intronic chr11:61288212(-) A-I      intronic chr11:61287634(-) A-I      intronic chr11:61287395(-) A-I      intronic chr11:61288183(-) A-I      intronic chr11:61325911(-) A-I      intronic chr11:61287613(-) A-I      intronic chr11:61287902(-) A-I      intronic chr11:61326383(-) A-I      intronic chr11:61312150(-) A-I      intronic chr11:61292555(-) A-I      intronic chr11:61287493(-) A-I      intronic chr11:61287829(-) A-I      intronic chr11:61299218(-) A-I      intronic chr11:61288115(-) A-I      intronic chr11:61287347(-) A-I      intronic chr11:61288160(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SYT7	chr11:61282920-61282921(-) m6A 3'UTR       27773535 chr11:61282934-61282935(-) m6A 3'UTR       27773535 chr11:61282952-61282953(-) m6A 3'UTR       27773535 chr11:61283002-61283003(-) m6A 3'UTR       27773535 chr11:61283008-61283009(-) m6A 3'UTR       27773535 chr11:61283100-61283101(-) m6A 3'UTR       27773535 chr11:61283110-61283111(-) m6A 3'UTR       27773535 chr11:61283120-61283121(-) m6A 3'UTR       27773535 chr11:61283161-61283162(-) m6A 3'UTR       27773535 chr11:61283243-61283244(-) m6A 3'UTR       27773535 chr11:61284910-61284911(-) m6A 3'UTR       27773535 chr11:61284975-61284976(-) m6A 3'UTR       24284625//27773535 chr11:61285022-61285023(-) m6A 3'UTR       27773535 chr11:61285123-61285124(-) m6A 3'UTR       24981863//27773535 chr11:61285192-61285193(-) m6A 3'UTR       27773535 chr11:61285244-61285245(-) m6A 3'UTR       27773535 chr11:61285350-61285351(-) m6A 3'UTR       27773535 chr11:61285385-61285386(-) m6A 3'UTR       24209618 chr11:61285494-61285495(-) m6A 3'UTR       24209618 chr11:61285991-61285992(-) m6A 3'UTR       24284625 chr11:61286153-61286154(-) m6A 3'UTR//CDS       27773535 chr11:61290577-61290578(-) m6A 3'UTR//CDS       27773535 chr11:61290583-61290584(-) m6A 3'UTR//CDS       27773535 chr11:61290664-61290665(-) m6A 3'UTR//CDS       24981863//27773535 chr11:61290670-61290671(-) m6A 3'UTR//CDS       24981863//27773535 chr11:61290712-61290713(-) m6A 3'UTR//CDS       24981863//27773535 chr11:61291315-61291316(-) m6A 3'UTR//CDS       24981863//27773535 chr11:61291330-61291331(-) m6A 3'UTR//CDS       27773535 chr11:61291348-61291349(-) m6A 3'UTR//CDS       27773535 chr11:61308032-61308033(-) m6A intron       27773535 chr11:61308136-61308137(-) m6A intron       27773535 chr11:61308159-61308160(-) m6A intron       24284625//25456834//27773535 chr11:61308208-61308209(-) m6A intron       24284625//25456834//27773535 chr11:61308257-61308258(-) m6A intron       24284625//25456834//27773535 chr11:61308262-61308263(-) m6A intron       24284625//25456834//27773535 chr11:61308325-61308326(-) m6A intron       24284625//25456834 chr11:61308409-61308410(-) m6A intron       24284625 chr11:61308444-61308445(-) m6A intron       24284625 chr11:61308476-61308477(-) m6A intron       24284625 chr11:61308545-61308546(-) m6A intron       24284625 chr11:61318865-61318866(-) m1A CDS       26863196

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SYT7	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H13
Interactor2: SYT7

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg