Basic Information:

  VIRBase ID:  

VHID00181372

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H13:  MIMAT0014700          BAD:  NM_032989     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H13	BAD
miRBase Accession/Entrez ID	MIMAT0014700	572
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BBC2//BCL2L8

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BAD	chr11:64043829(-) A-I      intronic chr11:64043832(-) A-I      intronic chr11:64043833(-) A-I      intronic chr11:64042345(-) A-I      intronic chr11:64042333(-) A-I      intronic chr11:64042335(-) A-I      intronic chr11:64042374(-) A-I      intronic chr11:64042375(-) A-I      intronic chr11:64042381(-) A-I      intronic chr11:64043871(-) A-I      intronic chr11:64043895(-) A-I      intronic chr11:64043936(-) A-I      intronic chr11:64043994(-) A-I      intronic chr11:64044019(-) A-I      intronic chr11:64044026(-) A-I      intronic chr11:64044071(-) A-I      intronic chr11:64044072(-) A-I      intronic chr11:64045034(-) A-I      intronic chr11:64045042(-) A-I      intronic chr11:64045048(-) A-I      intronic chr11:64041608(-) A-I      intronic chr11:64045077(-) A-I      intronic chr11:64045093(-) A-I      intronic chr11:64045094(-) A-I      intronic chr11:64045124(-) A-I      intronic chr11:64045183(-) A-I      intronic chr11:64045503(-) A-I      intronic chr11:64045515(-) A-I      intronic chr11:64045539(-) A-I      intronic chr11:64045542(-) A-I      intronic chr11:64047054(-) A-I      intronic chr11:64040745(-) A-I      intronic chr11:64040624(-) A-I      intronic chr11:64040671(-) A-I      intronic chr11:64040696(-) A-I      intronic chr11:64040700(-) A-I      intronic chr11:64040705(-) A-I      intronic chr11:64040723(-) A-I      intronic chr11:64040726(-) A-I      intronic chr11:64040798(-) A-I      intronic chr11:64040799(-) A-I      intronic chr11:64041606(-) A-I      intronic chr11:64041620(-) A-I      intronic chr11:64041671(-) A-I      intronic chr11:64041679(-) A-I      intronic chr11:64041696(-) A-I      intronic chr11:64041712(-) A-I      intronic chr11:64041737(-) A-I      intronic chr11:64041807(-) A-I      intronic chr11:64042101(-) A-I      intronic chr11:64042206(-) A-I      intronic chr11:64043812(-) A-I      intronic chr11:64043861(-) A-I      intronic chr11:64043866(-) A-I      intronic chr11:64043867(-) A-I      intronic chr11:64045092(-) A-I      intronic chr11:64041942(-) A-I      intronic chr11:64045184(-) A-I      intronic chr11:64043884(-) A-I      intronic chr11:64041812(-) A-I      intronic chr11:64042356(-) A-I      intronic chr11:64042405(-) A-I      intronic chr11:64041967(-) A-I      intronic chr11:64041747(-) A-I      intronic chr11:64041160(-) A-I      intronic chr11:64045190(-) A-I      intronic chr11:64047004(-) A-I      intronic chr11:64045658(-) A-I      intronic chr11:64042348(-) A-I      intronic chr11:64041702(-) A-I      intronic chr11:64041600(-) A-I      intronic chr11:64041736(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BAD	chr11:64037372-64037373(-) m6A 3'UTR       27773536 chr11:64037578-64037579(-) Y 3'UTR//CDS       26075521 chr11:64037659-64037660(-) m6A 3'UTR//CDS       24284625//27371828//27773536 chr11:64037714-64037715(-) m6A CDS       24284625//27371828//27773536 chr11:64037803-64037804(-) m6A 3'UTR//CDS       27371828//27773536 chr11:64039094-64039095(-) m6A 3'UTR//CDS//intron       27371828//27773536 chr11:64040194-64040195(-) m6A 5'UTR//intron       27371828//27773536 chr11:64040229-64040230(-) m6A 5'UTR//intron       27773536 chr11:64040238-64040239(-) m6A 5'UTR//intron       - chr11:64040255-64040256(-) m6A 5'UTR//intron       - chr11:64044478-64044479(-) m6A CDS//exon//intron       27773536 chr11:64044509-64044510(-) m6A CDS//exon//intron       27371828//27773536 chr11:64051799-64051800(-) m6A CDS//exon       24284625//24981863//27371828//27773536 chr11:64051984-64051985(-) m6A 5'UTR//intron       25456834//24981863//27371828 chr11:64051993-64051994(-) m6A 5'UTR//intron       25456834//24981863//27371828 chr11:64052036-64052037(-) m6A 5'UTR//intron       25456834//24981863 chr11:64052096-64052097(-) m6A 5'UTR//intron       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BAD	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H13
Interactor2: BAD

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg