Basic Information:

  VIRBase ID:  

VHID00181339

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H13:  MIMAT0014700          AK1:  NM_001318121     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H13	AK1
miRBase Accession/Entrez ID	MIMAT0014700	203
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HTL-S-58j

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AK1	chr9:130629458(-) A-I      3'UTR chr9:130629463(-) A-I      3'UTR chr9:130629461(-) A-I      3'UTR chr9:130629468(-) A-I      3'UTR chr9:130629467(-) A-I      3'UTR chr9:130629469(-) A-I      3'UTR chr9:130629485(-) A-I      3'UTR chr9:130629486(-) A-I      3'UTR chr9:130629506(-) A-I      3'UTR chr9:130629508(-) A-I      3'UTR chr9:130629517(-) A-I      3'UTR chr9:130629562(-) A-I      3'UTR chr9:130629545(-) A-I      3'UTR chr9:130629536(-) A-I      3'UTR chr9:130632646(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AK1	chr9:130629075-130629076(-) m6A 3'UTR       24981863 chr9:130629081-130629082(-) m6A 3'UTR       24981863 chr9:130629135-130629136(-) m6A 3'UTR       24981863 chr9:130629181-130629182(-) m6A 3'UTR       24981863 chr9:130629219-130629220(-) m6A 3'UTR       24981863 chr9:130629482-130629483(-) m6A 3'UTR       - chr9:130629774-130629775(-) m6A 3'UTR       24981863 chr9:130630119-130630120(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr9:130630148-130630149(-) m6A 3'UTR       24284625//24981863//27773535 chr9:130630332-130630333(-) m6A 3'UTR//CDS       24284625//27773535//27773536//22575960 chr9:130630641-130630642(-) m6A 3'UTR//CDS       24284625//27773535//27371828//22575960 chr9:130630661-130630662(-) m6A 3'UTR//CDS       27773535//27371828//22575960 chr9:130630682-130630683(-) m6A 3'UTR//CDS       24981863//27773535//27371828//22575960 chr9:130630712-130630713(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22575960 chr9:130630745-130630746(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22575960 chr9:130630785-130630786(-) m6A 3'UTR//CDS//intron       24284625//24981863//27773535//27371828//27773536//22575960 chr9:130634204-130634205(-) m6A 3'UTR//CDS       24284625//27773535//27371828//27773536 chr9:130634214-130634215(-) m6A 3'UTR//CDS       24284625//27773535//27371828//27773536 chr9:130635053-130635054(-) m6A 3'UTR//CDS//intron       24284625//24209618//27371828//27773536 chr9:130635325-130635326(-) m6A 3'UTR//CDS       24284625//24209618//27371828//27773536//22575960 chr9:130635408-130635409(-) m6A CDS//intron       24284625//24209618//27371828//27773536 chr9:130636906-130636907(-) m6A 5'UTR       24284625//24209618//24981863//27371828//27773536//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AK1	Cytosol K562 cells     - Exosome Blood     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H13
Interactor2: AK1

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg