Basic Information:

  VIRBase ID:  

VHID00178404

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H11-3p:  MIMAT0014698          EIF4A2:  NM_001967     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H11-3p	EIF4A2
miRBase Accession/Entrez ID	MIMAT0014698	1974
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BM-010//DDX2B//eIF-4A-II//EIF4A//eIF4A-II//EIF4F

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	EIF4A2	chr3:186501462-186501463(+) Am intron       - chr3:186502635-186502636(+) Am exon//intron       - chr3:186502791-186502792(+) m6A CDS//exon//intron       - chr3:186502845-186502846(+) m6A CDS//exon//intron       - chr3:186502877-186502878(+) m6A CDS//exon//intron       - chr3:186503825-186503826(+) m6A 3'UTR//CDS//exon       27773535 chr3:186504596-186504597(+) Tm exon//intron       - chr3:186505101-186505102(+) m6A exon//intron       27773535 chr3:186505213-186505214(+) Cm exon//intron       - chr3:186505658-186505659(+) m6A 3'UTR//CDS//exon       24981863//27773535 chr3:186506080-186506081(+) m6A exon//intron       27773535 chr3:186506178-186506179(+) m6A 3'UTR//exon//intron       27773535 chr3:186506301-186506302(+) m6A exon//intron       27773535 chr3:186506823-186506824(+) m6A exon//intron       24981863 chr3:186506957-186506958(+) m6A 3'UTR//CDS//exon       24284625//24981863//27773535 chr3:186506975-186506976(+) m6A 3'UTR//CDS//exon       24284625//24981863//27773535 chr3:186507001-186507002(+) m6A 3'UTR//CDS//exon       24284625//24981863//27773535 chr3:186507260-186507261(+) m6A 3'UTR//exon       24284625//24981863//27773535 chr3:186507381-186507382(+) m6A 3'UTR//exon       24981863//27773535 chr3:186507425-186507426(+) m6A 3'UTR//exon       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	EIF4A2	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H11-3p
Interactor2: EIF4A2

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg