Detail Information

Basic Information:


  VIRBase ID:  

VHID00178236

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H11-5p:           CEMP1:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H11-5p CEMP1
miRBase
Accession/Entrez ID
MIMAT0014697 752014
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - CP-23//CP23

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CEMP1
chr16:2580040-2580041(-) m6A 3'UTR       24284625//25456834
chr16:2580091-2580092(-) m6A 3'UTR       24284625//25456834
chr16:2580162-2580163(-) m6A 3'UTR       24284625//25456834
chr16:2580216-2580217(-) m6A 3'UTR       25456834
chr16:2580364-2580365(-) m6A CDS//intron       24284625
chr16:2580524-2580525(-) m6A CDS//intron       25456834
chr16:2580547-2580548(-) m6A CDS//intron       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CEMP1
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H11-5p
Interactor2: CEMP1

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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