Basic Information:

  VIRBase ID:  

VHID00178235

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H11-5p:  MIMAT0014697          PLIN4:  NM_001393888     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H11-5p	PLIN4
miRBase Accession/Entrez ID	MIMAT0014697	729359
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	KIAA1881//S3-12

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PLIN4	chr19:4511784(-) A-I      NonSyn:Lys->Glu chr19:4511783(-) A-I      NonSyn:Lys->Arg chr19:4515593(-) A-I      intronic chr19:4515601(-) A-I      intronic chr19:4515591(-) A-I      intronic chr19:4515592(-) A-I      intronic chr19:4515452(-) A-I      intronic chr19:4515454(-) A-I      intronic chr19:4515458(-) A-I      intronic chr19:4515459(-) A-I      intronic chr19:4515460(-) A-I      intronic chr19:4515484(-) A-I      intronic chr19:4515485(-) A-I      intronic chr19:4515527(-) A-I      intronic chr19:4515554(-) A-I      intronic chr19:4516057(-) A-I      intronic chr19:4516061(-) A-I      intronic chr19:4516069(-) A-I      intronic chr19:4516070(-) A-I      intronic chr19:4516144(-) A-I      intronic chr19:4516216(-) A-I      intronic chr19:4515463(-) A-I      intronic chr19:4516240(-) A-I      intronic chr19:4507538(-) A-I      intronic chr19:4507397(-) A-I      intronic chr19:4507512(-) A-I      intronic chr19:4507532(-) A-I      intronic chr19:4507589(-) A-I      intronic chr19:4514548(-) A-I      intronic chr19:4514573(-) A-I      intronic chr19:4514627(-) A-I      intronic chr19:4515451(-) A-I      intronic chr19:4516135(-) A-I      intronic chr19:4508478(-) A-I      intronic chr19:4508385(-) A-I      intronic chr19:4507401(-) A-I      intronic chr19:4516167(-) A-I      intronic chr19:4507339(-) A-I      intronic chr19:4515418(-) A-I      intronic chr19:4515416(-) A-I      intronic chr19:4514451(-) A-I      intronic chr19:4514400(-) A-I      intronic chr19:4515374(-) A-I      intronic chr19:4515354(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PLIN4	chr19:4502499-4502500(-) m6A 3'UTR       - chr19:4502530-4502531(-) m6A 3'UTR       24284625//25456834 chr19:4502548-4502549(-) m6A 3'UTR       24284625//25456834 chr19:4502570-4502571(-) m6A 3'UTR       25456834 chr19:4502637-4502638(-) m6A 3'UTR       25456834 chr19:4502725-4502726(-) m6A 3'UTR       25456834 chr19:4502787-4502788(-) m6A 3'UTR       25456834//27773535 chr19:4502843-4502844(-) m6A 3'UTR       25456834//27773535 chr19:4502996-4502997(-) m6A 3'UTR       - chr19:4503096-4503097(-) m6A 3'UTR       - chr19:4503120-4503121(-) m6A 3'UTR       - chr19:4503208-4503209(-) m6A 3'UTR       - chr19:4503215-4503216(-) m6A 3'UTR       - chr19:4503229-4503230(-) m6A 3'UTR       - chr19:4503261-4503262(-) m6A 3'UTR       - chr19:4503423-4503424(-) m6A 3'UTR       - chr19:4503439-4503440(-) m6A 3'UTR       - chr19:4503566-4503567(-) m6A 3'UTR       - chr19:4504359-4504360(-) m6A 3'UTR       - chr19:4504386-4504387(-) m6A 3'UTR       - chr19:4504405-4504406(-) m6A 3'UTR       - chr19:4510733-4510734(-) m6A CDS       25456834 chr19:4510750-4510751(-) m6A CDS       25456834 chr19:4510757-4510758(-) m6A CDS       25456834 chr19:4510773-4510774(-) m6A CDS       25456834 chr19:4510810-4510811(-) m6A CDS       25456834 chr19:4510895-4510896(-) m6A CDS       - chr19:4510910-4510911(-) m6A CDS       - chr19:4510921-4510922(-) m6A CDS       - chr19:4510987-4510988(-) m6A CDS       24284625 chr19:4511030-4511031(-) m6A CDS       24284625//27773535 chr19:4511039-4511040(-) m6A CDS       24284625//27773535 chr19:4511119-4511120(-) m6A CDS       24284625//27773535 chr19:4511129-4511130(-) m6A CDS       24284625//27773535 chr19:4511138-4511139(-) m6A CDS       24284625//27773535 chr19:4511185-4511186(-) m6A CDS       25456834 chr19:4511207-4511208(-) m6A CDS       25456834 chr19:4511218-4511219(-) m6A CDS       25456834 chr19:4511228-4511229(-) m6A CDS       25456834 chr19:4511237-4511238(-) m6A CDS       25456834 chr19:4511251-4511252(-) m6A CDS       25456834 chr19:4511482-4511483(-) m6A CDS       27773535 chr19:4511504-4511505(-) m6A CDS       27773535 chr19:4511515-4511516(-) m6A CDS       27773535 chr19:4511603-4511604(-) m6A CDS       25456834//27773535 chr19:4511614-4511615(-) m6A CDS       25456834//27773535 chr19:4511624-4511625(-) m6A CDS       25456834//27773535 chr19:4511633-4511634(-) m6A CDS       25456834//27773535 chr19:4511713-4511714(-) m6A CDS       25456834 chr19:4511779-4511780(-) m6A CDS       25456834 chr19:4511801-4511802(-) m6A CDS       25456834 chr19:4511812-4511813(-) m6A CDS       25456834//27773535 chr19:4511822-4511823(-) m6A CDS       25456834//27773535 chr19:4511831-4511832(-) m6A CDS       25456834//27773535 chr19:4511878-4511879(-) m6A CDS       25456834//27773535 chr19:4511900-4511901(-) m6A CDS       25456834//27773535 chr19:4511911-4511912(-) m6A CDS       25456834//27773535 chr19:4511921-4511922(-) m6A CDS       25456834//27773535 chr19:4511977-4511978(-) m6A CDS       27773535 chr19:4512020-4512021(-) m6A CDS       27773535 chr19:4512076-4512077(-) m6A CDS       24284625//25456834//24981863//27773535 chr19:4512098-4512099(-) m6A CDS       24284625//25456834//24981863//27773535 chr19:4512109-4512110(-) m6A CDS       24284625//25456834//24981863//27773535 chr19:4512119-4512120(-) m6A CDS       24284625//25456834//24981863//27773535 chr19:4512128-4512129(-) m6A CDS       24284625//25456834//24981863//27773535 chr19:4512175-4512176(-) m6A CDS       24284625//25456834//27773535 chr19:4512197-4512198(-) m6A CDS       24284625//25456834//27773535 chr19:4512208-4512209(-) m6A CDS       24284625//25456834//27773535 chr19:4512218-4512219(-) m6A CDS       24284625//25456834//27773535 chr19:4512274-4512275(-) m6A CDS       24284625//25456834//27773535 chr19:4512307-4512308(-) m6A CDS       24284625//25456834//27773535 chr19:4512373-4512374(-) m6A CDS       25456834 chr19:4512395-4512396(-) m6A CDS       25456834 chr19:4512406-4512407(-) m6A CDS       25456834 chr19:4512416-4512417(-) m6A CDS       25456834 chr19:4512425-4512426(-) m6A CDS       25456834 chr19:4512713-4512714(-) m6A CDS       27773535 chr19:4512769-4512770(-) m6A CDS       27773535 chr19:4512835-4512836(-) m6A CDS       27773535 chr19:4512868-4512869(-) m6A CDS       27773535 chr19:4512890-4512891(-) m6A CDS       27773535 chr19:4512901-4512902(-) m6A CDS       27773535 chr19:4512911-4512912(-) m6A CDS       27773535 chr19:4512920-4512921(-) m6A CDS       27773535 chr19:4512967-4512968(-) m6A CDS       - chr19:4513187-4513188(-) m6A CDS       24284625//25456834 chr19:4513198-4513199(-) m6A CDS       24284625//25456834 chr19:4513208-4513209(-) m6A CDS       24284625//25456834 chr19:4513295-4513296(-) m6A CDS       24284625//25456834//27773535 chr19:4513307-4513308(-) m6A CDS       24284625//25456834//24981863//27773535 chr19:4513316-4513317(-) m6A CDS       24284625//25456834//24981863//27773535 chr19:4513330-4513331(-) m6A CDS       24284625//25456834//24981863//27773535 chr19:4513363-4513364(-) m6A CDS       24284625//25456834//24981863 chr19:4513385-4513386(-) m6A CDS       24284625//25456834//24981863 chr19:4513396-4513397(-) m6A CDS       24284625//25456834//24981863 chr19:4513415-4513416(-) m6A CDS       24284625//25456834//24981863 chr19:4513462-4513463(-) m6A CDS       24284625//25456834 chr19:4513495-4513496(-) m6A CDS       24284625//25456834 chr19:4513528-4513529(-) m6A CDS       24284625//25456834 chr19:4513594-4513595(-) m6A CDS       - chr19:4513693-4513694(-) m6A CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PLIN4	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H11-5p
Interactor2: PLIN4

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg