Basic Information:

  VIRBase ID:  

VHID00178232

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H11-5p:  MIMAT0014697          PIM3:  NM_001001852     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H11-5p	PIM3
miRBase Accession/Entrez ID	MIMAT0014697	415116
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	pim-3

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PIM3	chr22:50354490-50354491(+) m6A 5'UTR//exon       24209618 chr22:50354650-50354651(+) m6A CDS//exon       24284625//24209618 chr22:50354724-50354725(+) m6A exon//intron       24284625//24209618 chr22:50354781-50354782(+) m6A CDS//exon       24284625//24209618 chr22:50355174-50355175(+) m6A CDS//exon       24284625//24209618//22575960 chr22:50355234-50355235(+) m6A CDS//exon       24209618//22575960 chr22:50355378-50355379(+) m6A CDS       24284625//22575960 chr22:50355435-50355436(+) m6A CDS       24284625//26404942//22575960 chr22:50356444-50356445(+) m6A CDS       24284625//22575960 chr22:50356803-50356804(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr22:50356821-50356822(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr22:50356838-50356839(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr22:50356942-50356943(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr22:50357016-50357017(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr22:50357339-50357340(+) m6A 3'UTR       26404942 chr22:50357379-50357380(+) m6A 3'UTR       26404942 chr22:50357438-50357439(+) m6A 3'UTR       26404942

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PIM3	Chromatin K562 cells     - Exosome Blood     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H11-5p
Interactor2: PIM3

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg