Basic Information:

  VIRBase ID:  

VHID00178231

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H11-5p:  MIMAT0014697          LDLRAD2:  NM_001013693     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H11-5p	LDLRAD2
miRBase Accession/Entrez ID	MIMAT0014697	401944
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	LDLRAD2	chr1:22144048(+) A-I      intronic chr1:22144056(+) A-I      intronic chr1:22143940(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LDLRAD2	chr1:22148722-22148723(+) m6A 3'UTR//exon       24284625//24981863//27773535//22575960 chr1:22148772-22148773(+) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//22575960 chr1:22148778-22148779(+) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//22575960 chr1:22148801-22148802(+) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22575960 chr1:22149157-22149158(+) m6A 3'UTR//intron       24284625//24981863//27773535 chr1:22149297-22149298(+) m6A 3'UTR//intron       24284625//27773535 chr1:22149347-22149348(+) m6A 3'UTR//intron       24284625//27773535 chr1:22149377-22149378(+) m6A 3'UTR//intron       24284625//27773535 chr1:22149472-22149473(+) m6A 3'UTR//intron       24981863 chr1:22149518-22149519(+) m6A 3'UTR//intron       25456834//24981863//27371828 chr1:22149999-22150000(+) m6A 3'UTR//intron       27773536 chr1:22150196-22150197(+) m6A 3'UTR//intron       25456834 chr1:22150737-22150738(+) m6A 3'UTR       24284625 chr1:22150758-22150759(+) m6A 3'UTR       24284625 chr1:22150792-22150793(+) m6A 3'UTR       24284625 chr1:22150804-22150805(+) m6A 3'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	LDLRAD2	Chromatin K562 cells     - Cytosol HeLa-S3 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H11-5p
Interactor2: LDLRAD2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg