Basic Information:

  VIRBase ID:  

VHID00178229

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H11-5p:  MIMAT0014697          C1orf226:  NM_001085375     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H11-5p	C1orf226
miRBase Accession/Entrez ID	MIMAT0014697	400793
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	C1orf226	chr1:162336853-162336854(+) m6A 5'UTR       24284625 chr1:162336928-162336929(+) m6A 5'UTR       24284625 chr1:162351707-162351708(+) m6A CDS       24284625 chr1:162351816-162351817(+) m6A CDS       25456834 chr1:162351848-162351849(+) m6A CDS       25456834//24981863 chr1:162351943-162351944(+) m6A CDS       24284625//25456834//24981863 chr1:162351970-162351971(+) m6A CDS       24284625//25456834 chr1:162352987-162352988(+) m6A CDS       24284625//25456834 chr1:162353032-162353033(+) m6A CDS       24284625//25456834 chr1:162353050-162353051(+) m6A CDS       24284625//25456834 chr1:162353060-162353061(+) m6A CDS       24284625//25456834//24981863 chr1:162353107-162353108(+) m6A CDS       24284625//25456834//24981863//22575960 chr1:162353135-162353136(+) m6A CDS       24284625//25456834//24981863//22575960 chr1:162353352-162353353(+) m6A CDS       24284625//25456834//24981863//22608085 chr1:162353419-162353420(+) m6A CDS       24284625//25456834//24981863//22608085 chr1:162353453-162353454(+) m6A CDS       24284625//25456834//24981863//22608085 chr1:162353629-162353630(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:162353685-162353686(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr1:162353746-162353747(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:162353814-162353815(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:162354334-162354335(+) m6A 3'UTR       25456834//24981863 chr1:162354373-162354374(+) m6A 3'UTR       25456834//24981863 chr1:162354411-162354412(+) m6A 3'UTR       25456834//24981863 chr1:162354440-162354441(+) m6A 3'UTR       25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	C1orf226	Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H11-5p
Interactor2: C1orf226

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg