Basic Information:

  VIRBase ID:  

VHID00178228

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H11-5p:  MIMAT0014697          GDF6:  NM_001001557     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H11-5p	GDF6
miRBase Accession/Entrez ID	MIMAT0014697	392255
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BMP-13//BMP13//CDMP2//KFM//KFS//KFS1//KFSL//SGM1//SYNS4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GDF6	chr8:97156550-97156551(-) m6A 3'UTR       25456834 chr8:97156667-97156668(-) m6A 3'UTR       25456834 chr8:97156760-97156761(-) m6A 3'UTR       25456834//24981863 chr8:97156821-97156822(-) m6A 3'UTR//CDS       25456834//24981863 chr8:97156926-97156927(-) m6A CDS//intron       25456834//24981863 chr8:97156935-97156936(-) m6A CDS//intron       25456834//24981863 chr8:97157073-97157074(-) m6A CDS//intron       24981863 chr8:97157295-97157296(-) m6A CDS//intron       - chr8:97157382-97157383(-) m6A CDS       - chr8:97157405-97157406(-) m6A CDS//intron       - chr8:97157550-97157551(-) m6A CDS       - chr8:97157557-97157558(-) m6A CDS       - chr8:97157688-97157689(-) m6A CDS       - chr8:97172610-97172611(-) m6A CDS       - chr8:97172698-97172699(-) m6A CDS       - chr8:97172722-97172723(-) m6A CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GDF6	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H11-5p
Interactor2: GDF6

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg