Detail Information

Basic Information:


  VIRBase ID:  

VHID00178220

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H11-5p:           ZNF445:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H11-5p ZNF445
miRBase
Accession/Entrez ID		 MIMAT0014697 353274
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - ZFP445//ZKSCAN15//ZNF168//ZSCAN47

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ZNF445
chr3:44505509(-) A-I      intronic
chr3:44516819(-) A-I      intronic
chr3:44511658(-) A-I      intronic
chr3:44507248(-) A-I      intronic
chr3:44505555(-) A-I      intronic
chr3:44505357(-) A-I      intronic
chr3:44507184(-) A-I      intronic
chr3:44506476(-) A-I      intronic
chr3:44506440(-) A-I      intronic
chr3:44504635(-) A-I      intronic
chr3:44505566(-) A-I      intronic
chr3:44505427(-) A-I      intronic
chr3:44505496(-) A-I      intronic
chr3:44505469(-) A-I      intronic
chr3:44505506(-) A-I      intronic
chr3:44504638(-) A-I      intronic
chr3:44499464(-) A-I      intronic
chr3:44504792(-) A-I      intronic
chr3:44517324(-) A-I      intronic
chr3:44482453(-) A-I      3'UTR
chr3:44484967(-) A-I      3'UTR
chr3:44482678(-) A-I      3'UTR
chr3:44482436(-) A-I      3'UTR
chr3:44482677(-) A-I      3'UTR
chr3:44482656(-) A-I      3'UTR
chr3:44482634(-) A-I      3'UTR
chr3:44482471(-) A-I      3'UTR
chr3:44482544(-) A-I      3'UTR
chr3:44482570(-) A-I      3'UTR
chr3:44482543(-) A-I      3'UTR
chr3:44482473(-) A-I      3'UTR
chr3:44485136(-) A-I      3'UTR
chr3:44485123(-) A-I      3'UTR
chr3:44482474(-) A-I      3'UTR
chr3:44482574(-) A-I      3'UTR
chr3:44485500(-) A-I      3'UTR
chr3:44485495(-) A-I      3'UTR
chr3:44482577(-) A-I      3'UTR
chr3:44485531(-) A-I      3'UTR
chr3:44482478(-) A-I      3'UTR
chr3:44485488(-) A-I      3'UTR
chr3:44482611(-) A-I      3'UTR
chr3:44485092(-) A-I      3'UTR
chr3:44484969(-) A-I      3'UTR
chr3:44484968(-) A-I      3'UTR
chr3:44506525(-) A-I      intronic
chr3:44496320(-) A-I      intronic
chr3:44495548(-) A-I      intronic
chr3:44496340(-) A-I      intronic
chr3:44495560(-) A-I      intronic
chr3:44506437(-) A-I      intronic
chr3:44496142(-) A-I      intronic
chr3:44499244(-) A-I      intronic
chr3:44511161(-) A-I      intronic
chr3:44498538(-) A-I      intronic
chr3:44507349(-) A-I      intronic
chr3:44494632(-) A-I      intronic
chr3:44506374(-) A-I      intronic
chr3:44516421(-) A-I      intronic
chr3:44511004(-) A-I      intronic
chr3:44505456(-) A-I      intronic
chr3:44514799(-) A-I      intronic
chr3:44514693(-) A-I      intronic
chr3:44516468(-) A-I      intronic
chr3:44495060(-) A-I      intronic
chr3:44516380(-) A-I      intronic
chr3:44511026(-) A-I      intronic
chr3:44514798(-) A-I      intronic
chr3:44499013(-) A-I      intronic
chr3:44514846(-) A-I      intronic
chr3:44495542(-) A-I      intronic
chr3:44505453(-) A-I      intronic
chr3:44504746(-) A-I      intronic
chr3:44514735(-) A-I      intronic
chr3:44504614(-) A-I      intronic
chr3:44511198(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ZNF445
chr3:44513998(-) A-G intron -    22484847
chr3:44495542(-) A-G intron -    22484847
chr3:44504614(-) A-G intron -    22484847
chr3:44505401(-) A-G intron -    22484847
chr3:44506374(-) A-G intron -    22484847
chr3:44506525(-) A-G intron -    22484847
chr3:44507349(-) A-G intron -    22484847
chr3:44511026(-) A-G intron -    22484847
chr3:44511069(-) A-G intron -    22484847
chr3:44511161(-) A-G intron -    22484847
chr3:44516552(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZNF445
chr3:44481073-44481074(-) m6A 3'UTR       -
chr3:44481092-44481093(-) m6A 3'UTR       -
chr3:44481098-44481099(-) m6A 3'UTR       -
chr3:44481113-44481114(-) m6A 3'UTR       -
chr3:44481162-44481163(-) m6A 3'UTR       -
chr3:44481276-44481277(-) m6A 3'UTR       22608085
chr3:44481329-44481330(-) m6A 3'UTR       24284625//25456834//27773535//22608085
chr3:44481369-44481370(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085
chr3:44481413-44481414(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085
chr3:44481422-44481423(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085
chr3:44481477-44481478(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr3:44483302-44483303(-) m6A 3'UTR       27773535
chr3:44483431-44483432(-) m6A 3'UTR       27773535
chr3:44483793-44483794(-) m6A 3'UTR       24209618//27773535//22608085
chr3:44483811-44483812(-) m6A 3'UTR       24209618//27773535//22608085
chr3:44483950-44483951(-) m6A 3'UTR       24284625//24981863//27773535//27371828//22608085
chr3:44484012-44484013(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr3:44484038-44484039(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr3:44484138-44484139(-) m6A 3'UTR       24284625//25456834//24981863//27371828//22608085
chr3:44484190-44484191(-) m6A 3'UTR       24284625//25456834//27371828//22608085
chr3:44485267-44485268(-) m6A 3'UTR       27773535
chr3:44485311-44485312(-) m6A 3'UTR       27773535
chr3:44485730-44485731(-) m6A 3'UTR       -
chr3:44485804-44485805(-) m6A 3'UTR       -
chr3:44486587-44486588(-) m6A 3'UTR       24284625
chr3:44486764-44486765(-) m6A 3'UTR       24284625//24981863//27773535
chr3:44486827-44486828(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr3:44486900-44486901(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr3:44487238-44487239(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44487282-44487283(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44487324-44487325(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44487330-44487331(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44487341-44487342(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44487613-44487614(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:44487738-44487739(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44487759-44487760(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44487841-44487842(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44488013-44488014(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:44488059-44488060(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:44488082-44488083(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:44488103-44488104(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:44488122-44488123(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:44488206-44488207(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44488253-44488254(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44488261-44488262(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44488301-44488302(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44488327-44488328(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44488355-44488356(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44488411-44488412(-) m6A CDS       24284625//24981863//27773535//27371828//22608085
chr3:44488438-44488439(-) m6A CDS       24284625//24981863//27773535//27371828//22608085
chr3:44488480-44488481(-) m6A CDS       24284625//24981863//27773535//27371828//22608085
chr3:44488523-44488524(-) m6A CDS       24284625//24981863//27773535//27371828//22608085
chr3:44488602-44488603(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085
chr3:44488620-44488621(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085
chr3:44488686-44488687(-) m6A CDS       24284625//24981863//27773535//27371828//22608085
chr3:44488714-44488715(-) m6A CDS       24284625//24981863//27773535//27371828//22608085
chr3:44488755-44488756(-) Y CDS       26075521
chr3:44488925-44488926(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44488954-44488955(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44489012-44489013(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44489041-44489042(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44489079-44489080(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085
chr3:44489097-44489098(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085
chr3:44489124-44489125(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085
chr3:44489200-44489201(-) m6A CDS       24284625//24981863//27773535//27371828//22608085
chr3:44489246-44489247(-) m6A CDS       24284625//24981863//27773535//27371828//22608085
chr3:44489265-44489266(-) m6A CDS       24284625//24981863//27773535//27371828//22608085
chr3:44489320-44489321(-) m6A CDS       24284625//24981863//27773535//27371828//22608085
chr3:44489377-44489378(-) m6A CDS       24284625//24981863//27773535//27371828//22608085
chr3:44489393-44489394(-) m6A CDS       24284625//24981863//27773535//27371828//22608085
chr3:44489478-44489479(-) m6A CDS       24284625//27773535//22608085
chr3:44489647-44489648(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:44489685-44489686(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:44489768-44489769(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:44489792-44489793(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:44489803-44489804(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:44489848-44489849(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:44489905-44489906(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr3:44489920-44489921(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085
chr3:44489965-44489966(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085
chr3:44490002-44490003(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085
chr3:44490012-44490013(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085
chr3:44490030-44490031(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085
chr3:44490165-44490166(-) m6A CDS       27773535
chr3:44490184-44490185(-) m6A CDS       27773535
chr3:44490210-44490211(-) m6A CDS       27773535
chr3:44492399-44492400(-) m6A CDS//exon       24284625
chr3:44496623-44496624(-) m6A CDS//exon       25456834//27371828//27773536
chr3:44496634-44496635(-) m6A CDS//exon       25456834//27371828//27773536
chr3:44496738-44496739(-) m6A CDS//exon       24284625//25456834//24981863//27371828//27773536//22575960//22608085
chr3:44496807-44496808(-) m6A CDS//exon       24284625//25456834//24981863//27371828//27773536//22608085
chr3:44496827-44496828(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr3:44496864-44496865(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr3:44496908-44496909(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr3:44496968-44496969(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:44497049-44497050(-) m6A 5'UTR//exon       27773535
chr3:44497081-44497082(-) m6A 5'UTR//exon       27773535
chr3:44497098-44497099(-) m6A 5'UTR//exon       27773535
chr3:44499741-44499742(-) m6A 5'UTR//exon//intron       24209618

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ZNF445
Chromatin K562 cells     -
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H11-5p
Interactor2: ZNF445

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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